TnSeqCorr

Top 10 genes with highest correlation to Rv1074c/fadA3:

update plotcorrelationlink to info on gene
Rv3160c/- (cc=0.5509) info on Rv3160c/-
Rv1069c/- (cc=0.5367) info on Rv1069c/-
Rv1071c/echA9 (cc=0.5258) info on Rv1071c/echA9
Rv1995/- (cc=0.5228) info on Rv1995/-
Rv2395/- (cc=0.5199) info on Rv2395/-
Rv3059/cyp136 (cc=0.5138) info on Rv3059/cyp136
Rv0853c/pdc (cc=0.5105) info on Rv0853c/pdc
Rv2007c/fdxA (cc=0.5105) info on Rv2007c/fdxA
Rv1852/ureG (cc=0.5077) info on Rv1852/ureG
Rv0241c/htdX (cc=0.5006) info on Rv0241c/htdX

Correlation of Rv1074c/fadA3 with Rv1995/-

Normalized LFCs for Rv1074c/fadA3:
(description and provenance of datasets)
Rv1074c/fadA3Rv1995/-
Fe_supp_jason_reseq

0.156

-0.238

low_pH_jason_reseq

-1.651

-0.373

NO_jason_reseq

-1.131

-0.486

B6_jason_reseq

0.294

0.489

MHCII_jason_reseq

0.55

0.984

Isoniazid02

0.787

0.151

Rifampicin4

0.709

0.347

Ethambutol3

2.327

0.213

Meropenem3

0.417

-0.482

Vancomycin16

0.117

-0.942

Rv2680_day32

-1.003

0.565

H37Rv_KO_MarP

-0.365

0.404

hypoxia_3wks

-0.578

-0.347

hypoxia_6wks

-0.42

0.651

glycerol

-0.492

-0.274

cholesterol

-0.829

-0.077

AJ

-0.23

-0.649

Bibs02

-0.372

-0.17

Bibs02c

-1.543

-0.815

BL6

0.206

-0.794

BL6a

-0.709

-0.984

BXD01

-0.276

-0.93

BXD010

0.07

-0.945

BXD011

-0.377

-0.573

BXD03

-0.348

-0.551

BXD04

-0.428

-0.816

BXD05

-0.118

-0.079

BXD06

-0.3

-0.715

BXD07

-0.282

-0.685

BXD08

-0.629

-0.513

BXD09

-0.441

-0.048

CAST

0.289

-0.225

CCcont

-0.023

-1.289

DS01

-0.313

-0.116

DS02

-0.321

0.014

DS04

-0.021

0.138

DS0c

0.179

0.225

GP01

-1.025

-0.947

GP02

-0.154

-1.042

GP0c

-1.127

-1.153

NOD

1.271

0.221

NZO

-0.16

-0.068

PWK

0.479

0.158

H37Rv_KO_CtpC

0.144

-0.579

H37Rv_KO_CtpD

-0.442

0.031

H37Rv_KO_Rv1272

0.994

0.396

H37Rv_KO_SugABC

0.225

-0.829

H37Rv_KO_MbtN

-0.354

0.54

Trans05

0.103

-0.233

macrophage_unactivated

0.982

0.29

IL1

0.047

0.175

Rapamycin

0.393

0.012

Tcell

0.0

-0.117

GMCSF

0.673

-0.758

IFNab

0.284

-0.184

IFNg

0.23

-0.812

IFNg_GMCSF1

0.317

0.013

Rv1432_day32

0.237

0.013

Rv1565c_day32

0.088

0.311

secA2_input

0.564

-0.269

delta_Rv3594

0.454

-0.168

delta_Rv3717

0.052

-0.252

delta_Rv3811

-0.028

-0.278

delta_Rv0954

1.149

0.165

PonA1

0.083

-0.234

EccD1_KO

0.46

1.089

EspI_KO

1.069

0.873

PE35_KO

1.517

0.729

PPE68_KO

1.072

0.63

glycerol2

1.118

0.911

lignocerate

1.327

1.003

oleate

0.143

0.773

phosphatidylcholine

1.452

0.895

acetate

0.158

0.339

glucAc

0.093

0.071

Rv0950ko

0.582

-0.154

Rv1096ko

0.244

-0.82

Rv3684ko

0.868

-0.698

delta_otsA_trehalose

2.072

1.4