Top 10 genes with highest correlation to Rv1070c/echA8:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1731/gabD2 | (cc=0.7318) | info on Rv1731/gabD2 |
| Rv1069c/- | (cc=0.7066) | info on Rv1069c/- |
| Rv1323/fadA4 | (cc=0.6934) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.691) | info on Rv3354/- |
| Rv1071c/echA9 | (cc=0.6892) | info on Rv1071c/echA9 |
| Rv3056/dinP | (cc=0.6678) | info on Rv3056/dinP |
| Rv2474c/- | (cc=0.6675) | info on Rv2474c/- |
| Rv0428c/- | (cc=0.6657) | info on Rv0428c/- |
| Rv2426c/- | (cc=0.6582) | info on Rv2426c/- |
| Rv2028c/- | (cc=0.6499) | info on Rv2028c/- |
Correlation of Rv1070c/echA8 with Rv3354/-
Normalized LFCs for Rv1070c/echA8:
(description and provenance of datasets)
| Rv1070c/echA8 | Rv3354/- | |
| Fe_supp_jason_reseq | 0.044 | -1.138 |
| low_pH_jason_reseq | -1.447 | -0.381 |
| NO_jason_reseq | -2.363 | -0.793 |
| B6_jason_reseq | -0.763 | 0.985 |
| MHCII_jason_reseq | -0.657 | 1.019 |
| Isoniazid02 | 0.955 | 1.043 |
| Rifampicin4 | 1.156 | 0.125 |
| Ethambutol3 | 5.307 | 0.398 |
| Meropenem3 | 0.067 | 1.179 |
| Vancomycin16 | 1.772 | 0.162 |
| Rv2680_day32 | -1.231 | 0.659 |
| H37Rv_KO_MarP | -0.203 | 0.422 |
| hypoxia_3wks | -3.856 | -0.347 |
| hypoxia_6wks | -3.061 | -0.595 |
| glycerol | -0.493 | 0.674 |
| cholesterol | 0.361 | 0.892 |
| AJ | -0.598 | -0.171 |
| Bibs02 | 0.107 | -0.029 |
| Bibs02c | -0.982 | 0.596 |
| BL6 | -1.623 | -0.912 |
| BL6a | -2.381 | -0.067 |
| BXD01 | -3.234 | -1.687 |
| BXD010 | -2.02 | -1.434 |
| BXD011 | -3.162 | -2.812 |
| BXD03 | -2.674 | -2.487 |
| BXD04 | -1.65 | -1.729 |
| BXD05 | -2.155 | -1.146 |
| BXD06 | -2.347 | -1.932 |
| BXD07 | -2.454 | -2.262 |
| BXD08 | -1.678 | -1.667 |
| BXD09 | -2.661 | -2.542 |
| CAST | -1.416 | 0.097 |
| CCcont | -1.565 | -1.82 |
| DS01 | -0.241 | -0.077 |
| DS02 | 0.425 | 0.269 |
| DS04 | 0.18 | 0.395 |
| DS0c | -0.438 | -0.597 |
| GP01 | -2.249 | -1.486 |
| GP02 | -2.219 | -0.295 |
| GP0c | -1.975 | -0.754 |
| NOD | -1.811 | -0.169 |
| NZO | -1.913 | 0.127 |
| PWK | -0.986 | 0.367 |
| H37Rv_KO_CtpC | -1.22 | -0.788 |
| H37Rv_KO_CtpD | -2.977 | -1.146 |
| H37Rv_KO_Rv1272 | -2.365 | -0.927 |
| H37Rv_KO_SugABC | -1.687 | -0.855 |
| H37Rv_KO_MbtN | -2.192 | -1.624 |
| Trans05 | -1.637 | -0.244 |
| macrophage_unactivated | -2.898 | -1.654 |
| IL1 | -4.034 | -1.649 |
| Rapamycin | -1.706 | -1.034 |
| Tcell | -3.483 | -1.473 |
| GMCSF | -1.991 | -2.118 |
| IFNab | -2.279 | -2.056 |
| IFNg | -4.191 | -0.949 |
| IFNg_GMCSF1 | -3.249 | -0.641 |
| Rv1432_day32 | -0.404 | 0.3 |
| Rv1565c_day32 | -1.316 | 0.635 |
| secA2_input | -0.712 | 0.645 |
| delta_Rv3594 | 0.315 | -0.395 |
| delta_Rv3717 | -0.795 | -0.21 |
| delta_Rv3811 | -0.913 | 0.592 |
| delta_Rv0954 | -0.19 | 0.58 |
| PonA1 | 0.446 | -0.802 |
| EccD1_KO | 1.25 | 1.217 |
| EspI_KO | 1.192 | 1.201 |
| PE35_KO | 0.858 | 0.204 |
| PPE68_KO | 1.069 | 1.254 |
| glycerol2 | 0.761 | 1.595 |
| lignocerate | 0.994 | 1.672 |
| oleate | 0.737 | 0.822 |
| phosphatidylcholine | 0.57 | 1.291 |
| acetate | 0.603 | 1.047 |
| glucAc | 1.012 | 1.449 |
| Rv0950ko | 0.543 | 0.365 |
| Rv1096ko | 1.113 | 0.268 |
| Rv3684ko | 0.177 | 0.933 |
| delta_otsA_trehalose | -0.229 | 0.808 |