Top 10 genes with highest correlation to Rv1062/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2607/pdxH | (cc=0.541) | info on Rv2607/pdxH |
| Rv3819/- | (cc=0.5225) | info on Rv3819/- |
| Rv0042c/- | (cc=0.5185) | info on Rv0042c/- |
| Rv1160/mutT2 | (cc=0.5161) | info on Rv1160/mutT2 |
| Rv3112/moaD1 | (cc=0.5022) | info on Rv3112/moaD1 |
| Rv3208A/TB9.4 | (cc=0.5021) | info on Rv3208A/TB9.4 |
| Rv0319/pcp | (cc=0.4983) | info on Rv0319/pcp |
| Rv3618/- | (cc=0.4966) | info on Rv3618/- |
| Rv1907c/- | (cc=0.4865) | info on Rv1907c/- |
| Rv3353c/- | (cc=0.4796) | info on Rv3353c/- |
Correlation of Rv1062/- with Rv0319/pcp
Normalized LFCs for Rv1062/-:
(description and provenance of datasets)
| Rv1062/- | Rv0319/pcp | |
| Fe_supp_jason_reseq | -1.489 | 0.29 |
| low_pH_jason_reseq | -0.549 | 1.109 |
| NO_jason_reseq | -1.355 | 0.058 |
| B6_jason_reseq | 0.802 | 0.452 |
| MHCII_jason_reseq | -0.755 | 0.777 |
| Isoniazid02 | 0.029 | 0.895 |
| Rifampicin4 | -1.424 | 0.636 |
| Ethambutol3 | -0.604 | 0.209 |
| Meropenem3 | -0.812 | 0.0 |
| Vancomycin16 | -0.573 | 0.499 |
| Rv2680_day32 | -1.763 | -0.121 |
| H37Rv_KO_MarP | -0.045 | 0.034 |
| hypoxia_3wks | -1.308 | 0.363 |
| hypoxia_6wks | -1.04 | 0.106 |
| glycerol | -0.429 | 0.0 |
| cholesterol | -0.448 | 0.12 |
| AJ | -0.099 | 0.289 |
| Bibs02 | -2.084 | -0.748 |
| Bibs02c | 0.086 | 0.344 |
| BL6 | 1.677 | 0.367 |
| BL6a | 0.649 | 0.077 |
| BXD01 | 0.577 | -0.092 |
| BXD010 | -0.353 | 0.211 |
| BXD011 | -0.85 | 0.065 |
| BXD03 | 0.753 | 0.14 |
| BXD04 | 0.62 | -0.367 |
| BXD05 | -0.542 | 0.924 |
| BXD06 | -0.012 | -0.251 |
| BXD07 | -0.012 | -0.233 |
| BXD08 | 0.507 | -0.278 |
| BXD09 | -0.023 | -0.284 |
| CAST | -0.33 | -0.265 |
| CCcont | 0.889 | 0.495 |
| DS01 | -0.315 | 0.491 |
| DS02 | -0.189 | 0.145 |
| DS04 | -0.066 | -0.714 |
| DS0c | 0.913 | 0.501 |
| GP01 | -0.628 | 0.022 |
| GP02 | -0.908 | -1.296 |
| GP0c | -1.418 | -0.648 |
| NOD | 2.055 | 0.488 |
| NZO | 0.553 | -0.767 |
| PWK | 1.063 | 0.131 |
| H37Rv_KO_CtpC | -0.055 | -0.824 |
| H37Rv_KO_CtpD | -1.295 | -2.477 |
| H37Rv_KO_Rv1272 | -0.897 | -1.818 |
| H37Rv_KO_SugABC | 0.476 | -0.776 |
| H37Rv_KO_MbtN | -1.468 | -0.808 |
| Trans05 | -0.056 | -0.917 |
| macrophage_unactivated | -1.228 | 0.161 |
| IL1 | -1.003 | 0.027 |
| Rapamycin | -0.939 | 0.157 |
| Tcell | 0.329 | 0.583 |
| GMCSF | -2.854 | -0.285 |
| IFNab | -1.388 | -0.738 |
| IFNg | -1.529 | -0.214 |
| IFNg_GMCSF1 | -0.478 | 0.16 |
| Rv1432_day32 | 0.993 | 0.541 |
| Rv1565c_day32 | 0.125 | 0.971 |
| secA2_input | -0.471 | 0.574 |
| delta_Rv3594 | 2.447 | 1.23 |
| delta_Rv3717 | 1.579 | 1.056 |
| delta_Rv3811 | 2.596 | 1.108 |
| delta_Rv0954 | 1.768 | 1.795 |
| PonA1 | 0.861 | 2.507 |
| EccD1_KO | -1.717 | 0.069 |
| EspI_KO | -0.237 | 0.63 |
| PE35_KO | -0.554 | -0.315 |
| PPE68_KO | 0.0 | 0.79 |
| glycerol2 | 0.803 | 1.77 |
| lignocerate | 1.766 | 2.289 |
| oleate | -2.887 | 0.457 |
| phosphatidylcholine | 1.543 | 1.923 |
| acetate | 1.859 | 1.662 |
| glucAc | 2.155 | 1.437 |
| Rv0950ko | -1.122 | -0.76 |
| Rv1096ko | -1.122 | -0.395 |
| Rv3684ko | 0.567 | -2.011 |
| delta_otsA_trehalose | 1.44 | 1.757 |