Top 10 genes with highest correlation to Rv0999/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0111/- | (cc=0.6698) | info on Rv0111/- |
| Rv2525c/- | (cc=0.646) | info on Rv2525c/- |
| Rv0436c/pssA | (cc=0.6397) | info on Rv0436c/pssA |
| Rv1006/- | (cc=0.6377) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.6363) | info on Rv2363/amiA2 |
| Rv1698/mctB | (cc=0.6243) | info on Rv1698/mctB |
| Rv3810/pirG | (cc=0.6163) | info on Rv3810/pirG |
| Rv0437c/psd | (cc=0.5875) | info on Rv0437c/psd |
| Rv2224c/caeA | (cc=0.5838) | info on Rv2224c/caeA |
| Rv1860/apa | (cc=0.5802) | info on Rv1860/apa |
Correlation of Rv0999/- with Rv2224c/caeA
Normalized LFCs for Rv0999/-:
(description and provenance of datasets)
| Rv0999/- | Rv2224c/caeA | |
| Fe_supp_jason_reseq | 1.07 | 2.788 |
| low_pH_jason_reseq | -2.859 | 0.545 |
| NO_jason_reseq | -0.79 | -3.87 |
| B6_jason_reseq | -0.668 | -1.175 |
| MHCII_jason_reseq | -0.177 | -0.49 |
| Isoniazid02 | -1.18 | -0.081 |
| Rifampicin4 | -6.0 | -6.0 |
| Ethambutol3 | -3.222 | -3.633 |
| Meropenem3 | -3.835 | -4.666 |
| Vancomycin16 | -6.0 | -6.0 |
| Rv2680_day32 | -0.811 | -2.43 |
| H37Rv_KO_MarP | -0.865 | -4.312 |
| hypoxia_3wks | 0.056 | -3.465 |
| hypoxia_6wks | -0.307 | -2.907 |
| glycerol | 0.398 | 1.659 |
| cholesterol | 2.859 | 2.409 |
| AJ | -0.871 | -3.629 |
| Bibs02 | 0.925 | -2.044 |
| Bibs02c | -0.083 | -2.537 |
| BL6 | -1.211 | 0.28 |
| BL6a | -1.322 | -1.53 |
| BXD01 | -0.918 | -1.646 |
| BXD010 | -1.239 | -0.061 |
| BXD011 | 1.126 | -0.338 |
| BXD03 | -0.489 | -1.393 |
| BXD04 | -0.673 | -1.562 |
| BXD05 | -0.396 | -0.357 |
| BXD06 | -0.748 | -1.375 |
| BXD07 | -0.58 | -0.94 |
| BXD08 | -0.659 | -1.68 |
| BXD09 | -0.395 | -0.553 |
| CAST | -1.957 | -3.947 |
| CCcont | 0.991 | 2.729 |
| DS01 | -0.546 | -3.535 |
| DS02 | 0.429 | -1.679 |
| DS04 | -0.266 | -1.563 |
| DS0c | -0.396 | -2.857 |
| GP01 | 0.574 | -0.67 |
| GP02 | 1.568 | -1.495 |
| GP0c | 0.445 | 0.932 |
| NOD | -0.975 | -2.958 |
| NZO | -1.608 | -3.585 |
| PWK | -0.602 | -3.704 |
| H37Rv_KO_CtpC | 0.918 | 0.146 |
| H37Rv_KO_CtpD | 1.633 | -0.557 |
| H37Rv_KO_Rv1272 | -0.146 | 0.467 |
| H37Rv_KO_SugABC | 1.311 | -0.587 |
| H37Rv_KO_MbtN | -0.317 | 1.022 |
| Trans05 | -0.733 | 0.292 |
| macrophage_unactivated | 0.458 | -0.881 |
| IL1 | 0.608 | 0.098 |
| Rapamycin | 1.903 | -0.034 |
| Tcell | -1.082 | -1.61 |
| GMCSF | 0.584 | -1.648 |
| IFNab | 1.224 | 1.575 |
| IFNg | 0.051 | -1.24 |
| IFNg_GMCSF1 | 0.845 | -1.653 |
| Rv1432_day32 | -1.785 | -3.245 |
| Rv1565c_day32 | -0.815 | -0.218 |
| secA2_input | -0.437 | -0.266 |
| delta_Rv3594 | 1.088 | 0.797 |
| delta_Rv3717 | 0.487 | 0.213 |
| delta_Rv3811 | 0.77 | 0.464 |
| delta_Rv0954 | 0.674 | 0.72 |
| PonA1 | 0.188 | -3.854 |
| EccD1_KO | -0.789 | -0.013 |
| EspI_KO | 0.1 | 0.04 |
| PE35_KO | 0.137 | -1.948 |
| PPE68_KO | 0.189 | -0.614 |
| glycerol2 | -0.747 | -2.159 |
| lignocerate | -2.208 | -2.67 |
| oleate | -0.855 | -3.797 |
| phosphatidylcholine | -1.288 | -3.751 |
| acetate | -0.497 | 0.444 |
| glucAc | -2.262 | 0.0 |
| Rv0950ko | -1.601 | -1.019 |
| Rv1096ko | -0.989 | 1.043 |
| Rv3684ko | -1.189 | 1.097 |
| delta_otsA_trehalose | -0.862 | 0.04 |