Top 10 genes with highest correlation to Rv0992c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2487c/PE_PGRS42 | (cc=0.5899) | info on Rv2487c/PE_PGRS42 |
| Rv3367/PE_PGRS51 | (cc=0.5741) | info on Rv3367/PE_PGRS51 |
| Rv2559c/- | (cc=0.5437) | info on Rv2559c/- |
| Rv2974c/- | (cc=0.5356) | info on Rv2974c/- |
| Rv0585c/- | (cc=0.535) | info on Rv0585c/- |
| Rv2012/- | (cc=0.5073) | info on Rv2012/- |
| Rv2030c/- | (cc=0.4982) | info on Rv2030c/- |
| Rv3401/- | (cc=0.4969) | info on Rv3401/- |
| Rv1818c/PE_PGRS33 | (cc=0.4955) | info on Rv1818c/PE_PGRS33 |
| Rv3087/- | (cc=0.4877) | info on Rv3087/- |
Correlation of Rv0992c/- with Rv2487c/PE_PGRS42
Normalized LFCs for Rv0992c/-:
(description and provenance of datasets)
| Rv0992c/- | Rv2487c/PE_PGRS42 | |
| Fe_supp_jason_reseq | -1.759 | -0.774 |
| low_pH_jason_reseq | -0.81 | -0.763 |
| NO_jason_reseq | 0.751 | 0.0 |
| B6_jason_reseq | 0.641 | 0.405 |
| MHCII_jason_reseq | 0.115 | 1.334 |
| Isoniazid02 | -0.071 | 0.732 |
| Rifampicin4 | 0.774 | 1.362 |
| Ethambutol3 | 0.039 | 1.166 |
| Meropenem3 | 3.544 | 2.673 |
| Vancomycin16 | 0.409 | 0.854 |
| Rv2680_day32 | -0.321 | 0.373 |
| H37Rv_KO_MarP | -0.416 | -0.059 |
| hypoxia_3wks | -1.806 | -0.319 |
| hypoxia_6wks | -2.059 | -1.566 |
| glycerol | 1.052 | 0.791 |
| cholesterol | 0.916 | 0.381 |
| AJ | -0.185 | 1.6 |
| Bibs02 | 0.672 | 0.121 |
| Bibs02c | 0.045 | 0.412 |
| BL6 | 0.097 | 0.05 |
| BL6a | -0.453 | -0.082 |
| BXD01 | -0.987 | 0.035 |
| BXD010 | -1.362 | -0.749 |
| BXD011 | -0.881 | -0.377 |
| BXD03 | -0.798 | -0.998 |
| BXD04 | -1.534 | -0.366 |
| BXD05 | 0.281 | 0.0 |
| BXD06 | -1.064 | -0.78 |
| BXD07 | -0.978 | -0.361 |
| BXD08 | -1.336 | -0.6 |
| BXD09 | -1.199 | -0.694 |
| CAST | 0.075 | 0.349 |
| CCcont | -1.166 | -0.289 |
| DS01 | 0.946 | 0.156 |
| DS02 | 0.581 | -0.06 |
| DS04 | 0.44 | 0.866 |
| DS0c | 0.635 | 0.17 |
| GP01 | 0.525 | -0.509 |
| GP02 | -0.612 | 0.55 |
| GP0c | -0.009 | -0.054 |
| NOD | -0.242 | 1.518 |
| NZO | 0.155 | 0.724 |
| PWK | 0.828 | 0.129 |
| H37Rv_KO_CtpC | 2.265 | 0.065 |
| H37Rv_KO_CtpD | 0.861 | -0.802 |
| H37Rv_KO_Rv1272 | 0.488 | 0.772 |
| H37Rv_KO_SugABC | -0.862 | 0.697 |
| H37Rv_KO_MbtN | 0.402 | 0.441 |
| Trans05 | 0.435 | 1.066 |
| macrophage_unactivated | -1.177 | -1.054 |
| IL1 | -0.291 | -0.81 |
| Rapamycin | -0.973 | -0.077 |
| Tcell | 0.042 | -0.515 |
| GMCSF | -0.499 | -0.642 |
| IFNab | -0.84 | -1.732 |
| IFNg | -0.869 | -1.433 |
| IFNg_GMCSF1 | -0.874 | -0.764 |
| Rv1432_day32 | 1.463 | 0.299 |
| Rv1565c_day32 | 0.667 | -0.55 |
| secA2_input | 0.214 | -0.318 |
| delta_Rv3594 | -0.514 | -0.35 |
| delta_Rv3717 | 0.311 | 0.205 |
| delta_Rv3811 | 0.281 | -0.409 |
| delta_Rv0954 | -0.36 | 0.074 |
| PonA1 | 0.115 | -0.888 |
| EccD1_KO | 0.204 | 0.266 |
| EspI_KO | 0.742 | 0.174 |
| PE35_KO | -0.073 | -0.449 |
| PPE68_KO | 0.243 | -0.723 |
| glycerol2 | -1.739 | -0.287 |
| lignocerate | 0.251 | 0.041 |
| oleate | -0.615 | -0.469 |
| phosphatidylcholine | -0.315 | 0.252 |
| acetate | 0.362 | 0.248 |
| glucAc | 0.785 | 0.635 |
| Rv0950ko | 0.078 | 0.953 |
| Rv1096ko | 0.998 | 1.393 |
| Rv3684ko | 1.51 | 1.107 |
| delta_otsA_trehalose | 0.366 | 0.329 |