Top 10 genes with highest correlation to Rv0987/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1676/- | (cc=0.5034) | info on Rv1676/- |
Rv1950c/- | (cc=0.4754) | info on Rv1950c/- |
Rv2958c/- | (cc=0.4701) | info on Rv2958c/- |
Rv3288c/usfY | (cc=0.4632) | info on Rv3288c/usfY |
Rv2253/- | (cc=0.4501) | info on Rv2253/- |
Rv3643/- | (cc=0.4366) | info on Rv3643/- |
Rv1585c/- | (cc=0.4315) | info on Rv1585c/- |
Rv3595c/PE_PGRS59 | (cc=0.4292) | info on Rv3595c/PE_PGRS59 |
Rv1145/mmpL13a | (cc=0.4285) | info on Rv1145/mmpL13a |
Rv3109/moaA1 | (cc=0.4282) | info on Rv3109/moaA1 |
Correlation of Rv0987/- with Rv1676/-
Normalized LFCs for Rv0987/-:
(description and provenance of datasets)
Rv0987/- | Rv1676/- | |
Fe_supp_jason_reseq | 0.601 | -0.818 |
low_pH_jason_reseq | -0.363 | 0.34 |
NO_jason_reseq | -0.78 | 0.533 |
B6_jason_reseq | -0.745 | -0.411 |
MHCII_jason_reseq | -0.373 | 0.103 |
Isoniazid02 | -0.087 | 0.268 |
Rifampicin4 | -0.601 | 0.726 |
Ethambutol3 | 0.0 | 0.039 |
Meropenem3 | 1.18 | 0.803 |
Vancomycin16 | -0.411 | 0.99 |
Rv2680_day32 | -0.344 | -0.393 |
H37Rv_KO_MarP | 0.356 | 1.507 |
hypoxia_3wks | 0.187 | 0.0 |
hypoxia_6wks | -0.102 | 0.808 |
glycerol | -0.363 | 1.181 |
cholesterol | -0.409 | -0.118 |
AJ | 0.185 | 1.062 |
Bibs02 | 0.407 | 0.138 |
Bibs02c | -0.747 | 0.85 |
BL6 | -0.266 | -0.138 |
BL6a | -0.56 | 0.502 |
BXD01 | -0.322 | -0.695 |
BXD010 | -0.731 | -0.8 |
BXD011 | -0.557 | -0.34 |
BXD03 | -0.709 | -1.209 |
BXD04 | 0.0 | -0.508 |
BXD05 | 0.299 | -0.148 |
BXD06 | -0.477 | -1.465 |
BXD07 | -0.342 | -0.865 |
BXD08 | -0.475 | -1.794 |
BXD09 | -0.397 | -1.256 |
CAST | 0.612 | 0.853 |
CCcont | 0.519 | 0.285 |
DS01 | 0.188 | 1.381 |
DS02 | -0.187 | 2.105 |
DS04 | 0.0 | 0.753 |
DS0c | 0.173 | 1.425 |
GP01 | -1.031 | -0.527 |
GP02 | 0.636 | 0.603 |
GP0c | -0.569 | 0.16 |
NOD | 0.234 | -0.381 |
NZO | 0.053 | 0.587 |
PWK | 0.347 | -0.053 |
H37Rv_KO_CtpC | 0.804 | 0.309 |
H37Rv_KO_CtpD | 1.081 | 2.042 |
H37Rv_KO_Rv1272 | 1.151 | 1.968 |
H37Rv_KO_SugABC | 1.081 | 1.851 |
H37Rv_KO_MbtN | 0.561 | 1.596 |
Trans05 | -0.113 | 1.077 |
macrophage_unactivated | 0.275 | -1.502 |
IL1 | -1.056 | -2.966 |
Rapamycin | -0.285 | -3.069 |
Tcell | -0.15 | -2.704 |
GMCSF | -0.792 | -2.64 |
IFNab | -0.907 | -3.607 |
IFNg | -0.951 | -3.188 |
IFNg_GMCSF1 | -1.119 | -2.13 |
Rv1432_day32 | 0.579 | 1.46 |
Rv1565c_day32 | 0.523 | 0.36 |
secA2_input | -0.582 | -0.568 |
delta_Rv3594 | -0.239 | -0.396 |
delta_Rv3717 | -1.305 | -0.615 |
delta_Rv3811 | -0.564 | -1.981 |
delta_Rv0954 | 0.138 | 0.194 |
PonA1 | 0.043 | 0.386 |
EccD1_KO | 0.0 | 1.168 |
EspI_KO | -0.197 | 1.372 |
PE35_KO | -0.633 | 1.607 |
PPE68_KO | -0.221 | 1.302 |
glycerol2 | 0.736 | 0.581 |
lignocerate | 0.202 | 0.843 |
oleate | 0.364 | -0.163 |
phosphatidylcholine | 0.36 | 0.542 |
acetate | -0.12 | 1.15 |
glucAc | -0.236 | 1.052 |
Rv0950ko | 0.199 | -1.33 |
Rv1096ko | -0.425 | 0.075 |
Rv3684ko | -0.226 | 0.0 |
delta_otsA_trehalose | 0.866 | -0.232 |