Top 10 genes with highest correlation to Rv0942/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.5704) | info on Rv3366/spoU |
| Rv2872/vapC43 | (cc=0.516) | info on Rv2872/vapC43 |
| Rv1731/gabD2 | (cc=0.5012) | info on Rv1731/gabD2 |
| Rv1833c/- | (cc=0.4975) | info on Rv1833c/- |
| Rv1282c/oppC | (cc=0.4731) | info on Rv1282c/oppC |
| Rv1032c/trcS | (cc=0.4698) | info on Rv1032c/trcS |
| Rv2426c/- | (cc=0.468) | info on Rv2426c/- |
| Rv0386/- | (cc=0.466) | info on Rv0386/- |
| Rv2007c/fdxA | (cc=0.4649) | info on Rv2007c/fdxA |
| Rv0347/- | (cc=0.4495) | info on Rv0347/- |
Correlation of Rv0942/- with Rv2426c/-
Normalized LFCs for Rv0942/-:
(description and provenance of datasets)
| Rv0942/- | Rv2426c/- | |
| Fe_supp_jason_reseq | -0.148 | -0.535 |
| low_pH_jason_reseq | -0.141 | 0.341 |
| NO_jason_reseq | 0.591 | 0.656 |
| B6_jason_reseq | -0.366 | 0.011 |
| MHCII_jason_reseq | -0.113 | -0.104 |
| Isoniazid02 | 1.467 | 0.909 |
| Rifampicin4 | 0.661 | -0.051 |
| Ethambutol3 | 2.432 | 1.734 |
| Meropenem3 | 0.188 | 0.531 |
| Vancomycin16 | 0.719 | 0.379 |
| Rv2680_day32 | -0.21 | -0.393 |
| H37Rv_KO_MarP | 0.962 | -0.151 |
| hypoxia_3wks | -0.056 | -1.216 |
| hypoxia_6wks | -0.265 | -0.351 |
| glycerol | -0.054 | -0.344 |
| cholesterol | 0.826 | -0.157 |
| AJ | 0.118 | 0.43 |
| Bibs02 | -0.136 | -0.028 |
| Bibs02c | -0.308 | 0.978 |
| BL6 | -0.282 | 0.557 |
| BL6a | 0.113 | 0.007 |
| BXD01 | -0.724 | -0.465 |
| BXD010 | -1.165 | -0.01 |
| BXD011 | -0.35 | -0.01 |
| BXD03 | -0.418 | 0.456 |
| BXD04 | -0.701 | -0.156 |
| BXD05 | 0.356 | -0.97 |
| BXD06 | -0.1 | -0.719 |
| BXD07 | 0.218 | -0.702 |
| BXD08 | -0.156 | -0.564 |
| BXD09 | -0.145 | -0.88 |
| CAST | 0.349 | 0.282 |
| CCcont | -1.024 | -0.493 |
| DS01 | 0.12 | 0.453 |
| DS02 | -0.147 | 0.734 |
| DS04 | -1.307 | 1.19 |
| DS0c | -0.542 | 0.121 |
| GP01 | 0.275 | -0.957 |
| GP02 | -0.603 | -1.014 |
| GP0c | -0.347 | -0.216 |
| NOD | 0.862 | 0.861 |
| NZO | 0.0 | -0.15 |
| PWK | 0.063 | 0.26 |
| H37Rv_KO_CtpC | 0.093 | -0.865 |
| H37Rv_KO_CtpD | -0.461 | -0.106 |
| H37Rv_KO_Rv1272 | 0.063 | -0.724 |
| H37Rv_KO_SugABC | 0.819 | -1.551 |
| H37Rv_KO_MbtN | 0.278 | -0.402 |
| Trans05 | -0.524 | -0.228 |
| macrophage_unactivated | -0.174 | -1.291 |
| IL1 | 0.053 | -1.02 |
| Rapamycin | -1.157 | -1.105 |
| Tcell | -0.968 | -0.583 |
| GMCSF | 0.185 | -0.491 |
| IFNab | -0.577 | -1.493 |
| IFNg | -0.171 | -1.072 |
| IFNg_GMCSF1 | -0.028 | -0.958 |
| Rv1432_day32 | -0.272 | 0.215 |
| Rv1565c_day32 | 0.253 | -0.752 |
| secA2_input | -0.022 | -0.499 |
| delta_Rv3594 | -0.519 | -0.413 |
| delta_Rv3717 | -0.076 | -0.206 |
| delta_Rv3811 | 0.043 | -0.055 |
| delta_Rv0954 | -1.622 | 0.6 |
| PonA1 | -0.62 | 0.18 |
| EccD1_KO | 0.533 | 1.023 |
| EspI_KO | 0.057 | 1.124 |
| PE35_KO | -0.633 | 0.601 |
| PPE68_KO | -0.23 | 1.209 |
| glycerol2 | 0.387 | 1.321 |
| lignocerate | 0.879 | 2.516 |
| oleate | -1.313 | -1.121 |
| phosphatidylcholine | 0.472 | 1.76 |
| acetate | 1.069 | 2.826 |
| glucAc | 1.463 | 2.032 |
| Rv0950ko | 0.488 | 0.709 |
| Rv1096ko | 2.515 | 1.809 |
| Rv3684ko | 1.677 | 1.742 |
| delta_otsA_trehalose | 0.598 | -0.332 |