Top 10 genes with highest correlation to Rv0942/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.5704) | info on Rv3366/spoU |
| Rv2872/vapC43 | (cc=0.516) | info on Rv2872/vapC43 |
| Rv1731/gabD2 | (cc=0.5012) | info on Rv1731/gabD2 |
| Rv1833c/- | (cc=0.4975) | info on Rv1833c/- |
| Rv1282c/oppC | (cc=0.4731) | info on Rv1282c/oppC |
| Rv1032c/trcS | (cc=0.4698) | info on Rv1032c/trcS |
| Rv2426c/- | (cc=0.468) | info on Rv2426c/- |
| Rv0386/- | (cc=0.466) | info on Rv0386/- |
| Rv2007c/fdxA | (cc=0.4649) | info on Rv2007c/fdxA |
| Rv0347/- | (cc=0.4495) | info on Rv0347/- |
Correlation of Rv0942/- with Rv3366/spoU
Normalized LFCs for Rv0942/-:
(description and provenance of datasets)
| Rv0942/- | Rv3366/spoU | |
| Fe_supp_jason_reseq | -0.148 | -1.345 |
| low_pH_jason_reseq | -0.141 | -1.36 |
| NO_jason_reseq | 0.591 | 0.94 |
| B6_jason_reseq | -0.366 | 0.179 |
| MHCII_jason_reseq | -0.113 | 0.919 |
| Isoniazid02 | 1.467 | -0.556 |
| Rifampicin4 | 0.661 | 0.793 |
| Ethambutol3 | 2.432 | -0.154 |
| Meropenem3 | 0.188 | 0.381 |
| Vancomycin16 | 0.719 | -0.138 |
| Rv2680_day32 | -0.21 | -0.683 |
| H37Rv_KO_MarP | 0.962 | 1.012 |
| hypoxia_3wks | -0.056 | -0.463 |
| hypoxia_6wks | -0.265 | -0.662 |
| glycerol | -0.054 | 0.563 |
| cholesterol | 0.826 | -0.44 |
| AJ | 0.118 | -0.081 |
| Bibs02 | -0.136 | -0.162 |
| Bibs02c | -0.308 | -0.142 |
| BL6 | -0.282 | -0.081 |
| BL6a | 0.113 | -1.045 |
| BXD01 | -0.724 | -1.875 |
| BXD010 | -1.165 | -1.722 |
| BXD011 | -0.35 | -1.305 |
| BXD03 | -0.418 | -1.743 |
| BXD04 | -0.701 | -1.927 |
| BXD05 | 0.356 | -0.858 |
| BXD06 | -0.1 | -1.423 |
| BXD07 | 0.218 | -2.32 |
| BXD08 | -0.156 | -0.595 |
| BXD09 | -0.145 | -1.348 |
| CAST | 0.349 | 0.317 |
| CCcont | -1.024 | -1.909 |
| DS01 | 0.12 | -0.979 |
| DS02 | -0.147 | -0.922 |
| DS04 | -1.307 | -0.145 |
| DS0c | -0.542 | -0.94 |
| GP01 | 0.275 | 0.436 |
| GP02 | -0.603 | -1.308 |
| GP0c | -0.347 | -0.058 |
| NOD | 0.862 | -0.358 |
| NZO | 0.0 | 0.377 |
| PWK | 0.063 | 0.114 |
| H37Rv_KO_CtpC | 0.093 | -0.02 |
| H37Rv_KO_CtpD | -0.461 | -0.065 |
| H37Rv_KO_Rv1272 | 0.063 | -1.386 |
| H37Rv_KO_SugABC | 0.819 | 0.15 |
| H37Rv_KO_MbtN | 0.278 | -0.681 |
| Trans05 | -0.524 | -1.305 |
| macrophage_unactivated | -0.174 | -1.944 |
| IL1 | 0.053 | -2.115 |
| Rapamycin | -1.157 | -3.637 |
| Tcell | -0.968 | -1.522 |
| GMCSF | 0.185 | -1.426 |
| IFNab | -0.577 | -2.582 |
| IFNg | -0.171 | -2.138 |
| IFNg_GMCSF1 | -0.028 | -1.335 |
| Rv1432_day32 | -0.272 | -0.014 |
| Rv1565c_day32 | 0.253 | 0.916 |
| secA2_input | -0.022 | -0.833 |
| delta_Rv3594 | -0.519 | -2.145 |
| delta_Rv3717 | -0.076 | -0.545 |
| delta_Rv3811 | 0.043 | -0.568 |
| delta_Rv0954 | -1.622 | -1.344 |
| PonA1 | -0.62 | -0.68 |
| EccD1_KO | 0.533 | -0.355 |
| EspI_KO | 0.057 | 0.433 |
| PE35_KO | -0.633 | -1.811 |
| PPE68_KO | -0.23 | -2.358 |
| glycerol2 | 0.387 | 1.319 |
| lignocerate | 0.879 | 1.128 |
| oleate | -1.313 | -0.457 |
| phosphatidylcholine | 0.472 | 1.297 |
| acetate | 1.069 | 1.215 |
| glucAc | 1.463 | 1.557 |
| Rv0950ko | 0.488 | 1.963 |
| Rv1096ko | 2.515 | 1.215 |
| Rv3684ko | 1.677 | 2.227 |
| delta_otsA_trehalose | 0.598 | -1.723 |