Top 10 genes with highest correlation to Rv0934/pstS1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0940c/- | (cc=0.6869) | info on Rv0940c/- |
| Rv3389c/htdY | (cc=0.6347) | info on Rv3389c/htdY |
| Rv3473c/bpoA | (cc=0.6326) | info on Rv3473c/bpoA |
| Rv1489A/- | (cc=0.6258) | info on Rv1489A/- |
| Rv2281/pitB | (cc=0.6159) | info on Rv2281/pitB |
| Rv1159A/- | (cc=0.5509) | info on Rv1159A/- |
| Rv1169c/lipX | (cc=0.5252) | info on Rv1169c/lipX |
| Rv0232/- | (cc=0.524) | info on Rv0232/- |
| Rv3508/PE_PGRS54 | (cc=0.5202) | info on Rv3508/PE_PGRS54 |
| Rv0343/iniC | (cc=0.5202) | info on Rv0343/iniC |
Correlation of Rv0934/pstS1 with Rv3508/PE_PGRS54
Normalized LFCs for Rv0934/pstS1:
(description and provenance of datasets)
| Rv0934/pstS1 | Rv3508/PE_PGRS54 | |
| Fe_supp_jason_reseq | -0.764 | -0.532 |
| low_pH_jason_reseq | -0.391 | 0.0 |
| NO_jason_reseq | 0.722 | 0.0 |
| B6_jason_reseq | -0.065 | -0.103 |
| MHCII_jason_reseq | 0.128 | 0.591 |
| Isoniazid02 | -1.689 | -2.021 |
| Rifampicin4 | 0.766 | 0.772 |
| Ethambutol3 | -2.021 | -1.28 |
| Meropenem3 | -1.711 | -1.748 |
| Vancomycin16 | -0.52 | -0.727 |
| Rv2680_day32 | 0.066 | 0.046 |
| H37Rv_KO_MarP | -0.069 | -0.103 |
| hypoxia_3wks | -0.419 | -0.215 |
| hypoxia_6wks | 0.175 | -0.616 |
| glycerol | 0.629 | 1.028 |
| cholesterol | 0.085 | 0.648 |
| AJ | 0.825 | 0.726 |
| Bibs02 | -0.389 | 0.73 |
| Bibs02c | 0.33 | 0.415 |
| BL6 | 0.977 | -0.269 |
| BL6a | 0.304 | 0.27 |
| BXD01 | 0.422 | 0.259 |
| BXD010 | 0.584 | -0.276 |
| BXD011 | 0.511 | -0.236 |
| BXD03 | 0.348 | -0.033 |
| BXD04 | 0.511 | 0.03 |
| BXD05 | 0.628 | 0.397 |
| BXD06 | 0.692 | 0.182 |
| BXD07 | 0.338 | 0.408 |
| BXD08 | 0.853 | 0.947 |
| BXD09 | 0.432 | 0.162 |
| CAST | 0.23 | 0.364 |
| CCcont | 0.876 | -0.193 |
| DS01 | -0.092 | -0.058 |
| DS02 | 0.082 | 0.104 |
| DS04 | -0.52 | 0.607 |
| DS0c | 0.195 | -0.28 |
| GP01 | 0.91 | 1.149 |
| GP02 | 0.519 | 1.255 |
| GP0c | -0.494 | 1.092 |
| NOD | -0.062 | -0.169 |
| NZO | 0.548 | 0.272 |
| PWK | 0.983 | 0.783 |
| H37Rv_KO_CtpC | 0.027 | -0.209 |
| H37Rv_KO_CtpD | -0.76 | 0.441 |
| H37Rv_KO_Rv1272 | -0.319 | 0.934 |
| H37Rv_KO_SugABC | -0.146 | -0.243 |
| H37Rv_KO_MbtN | -1.123 | 0.184 |
| Trans05 | -0.059 | 0.361 |
| macrophage_unactivated | -0.249 | -0.287 |
| IL1 | -0.424 | -0.365 |
| Rapamycin | -0.439 | -1.126 |
| Tcell | 0.169 | -1.072 |
| GMCSF | -0.209 | -0.158 |
| IFNab | -0.372 | -1.345 |
| IFNg | 0.032 | -1.082 |
| IFNg_GMCSF1 | 0.559 | -0.698 |
| Rv1432_day32 | 0.83 | 0.855 |
| Rv1565c_day32 | -0.502 | -0.52 |
| secA2_input | -0.067 | 0.131 |
| delta_Rv3594 | -0.698 | -0.402 |
| delta_Rv3717 | -1.192 | -0.352 |
| delta_Rv3811 | -1.037 | -0.269 |
| delta_Rv0954 | -0.543 | -1.151 |
| PonA1 | -0.383 | 0.032 |
| EccD1_KO | 0.102 | -0.207 |
| EspI_KO | 0.676 | 0.043 |
| PE35_KO | 0.481 | -0.28 |
| PPE68_KO | 0.47 | -0.525 |
| glycerol2 | 1.275 | 0.347 |
| lignocerate | 1.458 | 0.157 |
| oleate | 0.559 | 0.296 |
| phosphatidylcholine | 0.857 | 0.451 |
| acetate | 1.323 | 0.474 |
| glucAc | 1.288 | 0.753 |
| Rv0950ko | -0.148 | -0.057 |
| Rv1096ko | 0.121 | 0.226 |
| Rv3684ko | 0.206 | -0.193 |
| delta_otsA_trehalose | -2.021 | -0.026 |