Top 10 genes with highest correlation to Rv0918/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0071/- | (cc=0.5683) | info on Rv0071/- |
| Rv0615/- | (cc=0.5657) | info on Rv0615/- |
| Rv2627c/- | (cc=0.5305) | info on Rv2627c/- |
| Rv0303/- | (cc=0.5206) | info on Rv0303/- |
| Rv1192/- | (cc=0.5063) | info on Rv1192/- |
| Rv1181/pks4 | (cc=0.5054) | info on Rv1181/pks4 |
| Rv3450c/eccB4 | (cc=0.5004) | info on Rv3450c/eccB4 |
| Rv3606c/folK | (cc=0.4986) | info on Rv3606c/folK |
| Rv3612c/- | (cc=0.4985) | info on Rv3612c/- |
| Rv0221/- | (cc=0.4923) | info on Rv0221/- |
Correlation of Rv0918/- with Rv1181/pks4
Normalized LFCs for Rv0918/-:
(description and provenance of datasets)
| Rv0918/- | Rv1181/pks4 | |
| Fe_supp_jason_reseq | -0.019 | -0.508 |
| low_pH_jason_reseq | -1.362 | 0.179 |
| NO_jason_reseq | 0.459 | -0.564 |
| B6_jason_reseq | 0.781 | 1.952 |
| MHCII_jason_reseq | 1.154 | 2.203 |
| Isoniazid02 | 0.112 | 0.244 |
| Rifampicin4 | -0.187 | -0.165 |
| Ethambutol3 | 1.223 | 0.687 |
| Meropenem3 | 0.839 | 0.137 |
| Vancomycin16 | 0.424 | 0.255 |
| Rv2680_day32 | 2.915 | -0.253 |
| H37Rv_KO_MarP | 1.067 | 0.21 |
| hypoxia_3wks | -0.797 | -0.283 |
| hypoxia_6wks | -0.042 | -0.088 |
| glycerol | -0.554 | 0.721 |
| cholesterol | 0.024 | 0.512 |
| AJ | 1.316 | 0.508 |
| Bibs02 | 0.02 | 0.011 |
| Bibs02c | 0.706 | -0.035 |
| BL6 | -0.325 | -1.076 |
| BL6a | 0.376 | -0.562 |
| BXD01 | -0.509 | -2.015 |
| BXD010 | -0.297 | -0.893 |
| BXD011 | -1.106 | -1.018 |
| BXD03 | -0.644 | -1.344 |
| BXD04 | -1.75 | -1.303 |
| BXD05 | -1.395 | -0.967 |
| BXD06 | -0.671 | -1.624 |
| BXD07 | -1.133 | -1.523 |
| BXD08 | -0.183 | -1.691 |
| BXD09 | -0.608 | -1.545 |
| CAST | -0.133 | -0.025 |
| CCcont | -0.571 | -1.157 |
| DS01 | 0.065 | 0.026 |
| DS02 | 0.512 | -0.098 |
| DS04 | 0.607 | -0.468 |
| DS0c | 1.031 | -0.061 |
| GP01 | -2.828 | -1.655 |
| GP02 | -1.939 | -1.466 |
| GP0c | -0.857 | -1.95 |
| NOD | 0.285 | 0.259 |
| NZO | 0.283 | 0.107 |
| PWK | -0.033 | 0.638 |
| H37Rv_KO_CtpC | 0.238 | -1.24 |
| H37Rv_KO_CtpD | -0.796 | -1.259 |
| H37Rv_KO_Rv1272 | -0.397 | -1.596 |
| H37Rv_KO_SugABC | -1.469 | -0.505 |
| H37Rv_KO_MbtN | -0.42 | -0.472 |
| Trans05 | -0.428 | -0.869 |
| macrophage_unactivated | -1.341 | -1.973 |
| IL1 | -0.151 | -0.169 |
| Rapamycin | -1.065 | 0.034 |
| Tcell | -1.342 | -2.512 |
| GMCSF | 0.605 | -1.838 |
| IFNab | -0.898 | -0.822 |
| IFNg | -1.355 | -0.764 |
| IFNg_GMCSF1 | -0.531 | -0.77 |
| Rv1432_day32 | 0.692 | -0.459 |
| Rv1565c_day32 | -1.136 | -0.63 |
| secA2_input | -0.955 | -0.373 |
| delta_Rv3594 | -0.561 | 0.416 |
| delta_Rv3717 | 0.466 | -0.106 |
| delta_Rv3811 | 0.474 | 0.193 |
| delta_Rv0954 | -0.557 | -0.305 |
| PonA1 | 1.163 | -0.235 |
| EccD1_KO | -1.187 | -0.776 |
| EspI_KO | -2.028 | -0.673 |
| PE35_KO | -1.762 | -0.16 |
| PPE68_KO | -2.176 | -0.269 |
| glycerol2 | -0.39 | -0.144 |
| lignocerate | 0.0 | 1.277 |
| oleate | -0.109 | -0.865 |
| phosphatidylcholine | -0.297 | -0.024 |
| acetate | -0.52 | 0.309 |
| glucAc | 0.224 | 0.363 |
| Rv0950ko | 0.169 | -0.084 |
| Rv1096ko | 1.098 | 1.294 |
| Rv3684ko | 0.734 | 0.265 |
| delta_otsA_trehalose | 0.66 | 1.196 |