Top 10 genes with highest correlation to Rv0918/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0071/- | (cc=0.5683) | info on Rv0071/- |
| Rv0615/- | (cc=0.5657) | info on Rv0615/- |
| Rv2627c/- | (cc=0.5305) | info on Rv2627c/- |
| Rv0303/- | (cc=0.5206) | info on Rv0303/- |
| Rv1192/- | (cc=0.5063) | info on Rv1192/- |
| Rv1181/pks4 | (cc=0.5054) | info on Rv1181/pks4 |
| Rv3450c/eccB4 | (cc=0.5004) | info on Rv3450c/eccB4 |
| Rv3606c/folK | (cc=0.4986) | info on Rv3606c/folK |
| Rv3612c/- | (cc=0.4985) | info on Rv3612c/- |
| Rv0221/- | (cc=0.4923) | info on Rv0221/- |
Correlation of Rv0918/- with Rv0615/-
Normalized LFCs for Rv0918/-:
(description and provenance of datasets)
| Rv0918/- | Rv0615/- | |
| Fe_supp_jason_reseq | -0.019 | 0.382 |
| low_pH_jason_reseq | -1.362 | -0.579 |
| NO_jason_reseq | 0.459 | 1.181 |
| B6_jason_reseq | 0.781 | 1.475 |
| MHCII_jason_reseq | 1.154 | 2.31 |
| Isoniazid02 | 0.112 | 0.176 |
| Rifampicin4 | -0.187 | 1.194 |
| Ethambutol3 | 1.223 | 0.305 |
| Meropenem3 | 0.839 | 0.91 |
| Vancomycin16 | 0.424 | 1.088 |
| Rv2680_day32 | 2.915 | 0.717 |
| H37Rv_KO_MarP | 1.067 | 1.798 |
| hypoxia_3wks | -0.797 | 0.738 |
| hypoxia_6wks | -0.042 | 0.152 |
| glycerol | -0.554 | -0.178 |
| cholesterol | 0.024 | -0.423 |
| AJ | 1.316 | 0.866 |
| Bibs02 | 0.02 | 0.135 |
| Bibs02c | 0.706 | 0.875 |
| BL6 | -0.325 | -0.652 |
| BL6a | 0.376 | 0.716 |
| BXD01 | -0.509 | -0.092 |
| BXD010 | -0.297 | -1.463 |
| BXD011 | -1.106 | -0.809 |
| BXD03 | -0.644 | -0.646 |
| BXD04 | -1.75 | -1.157 |
| BXD05 | -1.395 | -0.66 |
| BXD06 | -0.671 | -0.547 |
| BXD07 | -1.133 | -0.839 |
| BXD08 | -0.183 | 1.721 |
| BXD09 | -0.608 | -1.01 |
| CAST | -0.133 | 0.943 |
| CCcont | -0.571 | -0.643 |
| DS01 | 0.065 | 1.319 |
| DS02 | 0.512 | 1.434 |
| DS04 | 0.607 | 1.287 |
| DS0c | 1.031 | 1.194 |
| GP01 | -2.828 | -0.765 |
| GP02 | -1.939 | 0.811 |
| GP0c | -0.857 | -1.935 |
| NOD | 0.285 | 1.72 |
| NZO | 0.283 | 1.175 |
| PWK | -0.033 | 0.165 |
| H37Rv_KO_CtpC | 0.238 | -1.25 |
| H37Rv_KO_CtpD | -0.796 | -0.562 |
| H37Rv_KO_Rv1272 | -0.397 | -1.053 |
| H37Rv_KO_SugABC | -1.469 | 0.719 |
| H37Rv_KO_MbtN | -0.42 | -0.097 |
| Trans05 | -0.428 | -0.391 |
| macrophage_unactivated | -1.341 | 0.663 |
| IL1 | -0.151 | 0.365 |
| Rapamycin | -1.065 | 0.255 |
| Tcell | -1.342 | 0.456 |
| GMCSF | 0.605 | -0.098 |
| IFNab | -0.898 | -0.789 |
| IFNg | -1.355 | -0.468 |
| IFNg_GMCSF1 | -0.531 | -0.55 |
| Rv1432_day32 | 0.692 | 0.494 |
| Rv1565c_day32 | -1.136 | 0.1 |
| secA2_input | -0.955 | -0.211 |
| delta_Rv3594 | -0.561 | 0.173 |
| delta_Rv3717 | 0.466 | 0.793 |
| delta_Rv3811 | 0.474 | 1.16 |
| delta_Rv0954 | -0.557 | -0.333 |
| PonA1 | 1.163 | 0.323 |
| EccD1_KO | -1.187 | 0.592 |
| EspI_KO | -2.028 | -1.44 |
| PE35_KO | -1.762 | -0.324 |
| PPE68_KO | -2.176 | -0.985 |
| glycerol2 | -0.39 | 0.136 |
| lignocerate | 0.0 | 0.026 |
| oleate | -0.109 | 0.583 |
| phosphatidylcholine | -0.297 | 0.413 |
| acetate | -0.52 | -0.949 |
| glucAc | 0.224 | -0.341 |
| Rv0950ko | 0.169 | 0.965 |
| Rv1096ko | 1.098 | 0.564 |
| Rv3684ko | 0.734 | 1.369 |
| delta_otsA_trehalose | 0.66 | 1.962 |