Top 10 genes with highest correlation to Rv0918/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0071/- | (cc=0.5683) | info on Rv0071/- |
| Rv0615/- | (cc=0.5657) | info on Rv0615/- |
| Rv2627c/- | (cc=0.5305) | info on Rv2627c/- |
| Rv0303/- | (cc=0.5206) | info on Rv0303/- |
| Rv1192/- | (cc=0.5063) | info on Rv1192/- |
| Rv1181/pks4 | (cc=0.5054) | info on Rv1181/pks4 |
| Rv3450c/eccB4 | (cc=0.5004) | info on Rv3450c/eccB4 |
| Rv3606c/folK | (cc=0.4986) | info on Rv3606c/folK |
| Rv3612c/- | (cc=0.4985) | info on Rv3612c/- |
| Rv0221/- | (cc=0.4923) | info on Rv0221/- |
Correlation of Rv0918/- with Rv0071/-
Normalized LFCs for Rv0918/-:
(description and provenance of datasets)
| Rv0918/- | Rv0071/- | |
| Fe_supp_jason_reseq | -0.019 | 0.624 |
| low_pH_jason_reseq | -1.362 | -0.139 |
| NO_jason_reseq | 0.459 | 0.517 |
| B6_jason_reseq | 0.781 | 1.764 |
| MHCII_jason_reseq | 1.154 | 1.675 |
| Isoniazid02 | 0.112 | 0.073 |
| Rifampicin4 | -0.187 | 0.75 |
| Ethambutol3 | 1.223 | 1.131 |
| Meropenem3 | 0.839 | 0.694 |
| Vancomycin16 | 0.424 | 0.218 |
| Rv2680_day32 | 2.915 | 1.537 |
| H37Rv_KO_MarP | 1.067 | 0.059 |
| hypoxia_3wks | -0.797 | -0.152 |
| hypoxia_6wks | -0.042 | -0.182 |
| glycerol | -0.554 | 1.16 |
| cholesterol | 0.024 | 1.207 |
| AJ | 1.316 | -0.504 |
| Bibs02 | 0.02 | 0.474 |
| Bibs02c | 0.706 | 0.887 |
| BL6 | -0.325 | 0.441 |
| BL6a | 0.376 | -0.265 |
| BXD01 | -0.509 | -0.919 |
| BXD010 | -0.297 | -0.781 |
| BXD011 | -1.106 | -0.745 |
| BXD03 | -0.644 | -1.044 |
| BXD04 | -1.75 | -0.664 |
| BXD05 | -1.395 | -0.091 |
| BXD06 | -0.671 | -0.636 |
| BXD07 | -1.133 | -0.722 |
| BXD08 | -0.183 | -0.8 |
| BXD09 | -0.608 | -0.69 |
| CAST | -0.133 | 0.235 |
| CCcont | -0.571 | -0.342 |
| DS01 | 0.065 | 0.301 |
| DS02 | 0.512 | 0.767 |
| DS04 | 0.607 | 0.51 |
| DS0c | 1.031 | -0.093 |
| GP01 | -2.828 | -2.601 |
| GP02 | -1.939 | -2.703 |
| GP0c | -0.857 | -1.661 |
| NOD | 0.285 | 1.694 |
| NZO | 0.283 | 0.027 |
| PWK | -0.033 | 0.443 |
| H37Rv_KO_CtpC | 0.238 | 0.0 |
| H37Rv_KO_CtpD | -0.796 | 0.247 |
| H37Rv_KO_Rv1272 | -0.397 | -0.757 |
| H37Rv_KO_SugABC | -1.469 | -0.655 |
| H37Rv_KO_MbtN | -0.42 | -0.546 |
| Trans05 | -0.428 | -0.911 |
| macrophage_unactivated | -1.341 | 0.085 |
| IL1 | -0.151 | 0.181 |
| Rapamycin | -1.065 | 0.779 |
| Tcell | -1.342 | -0.088 |
| GMCSF | 0.605 | 0.671 |
| IFNab | -0.898 | -0.366 |
| IFNg | -1.355 | -0.171 |
| IFNg_GMCSF1 | -0.531 | 0.776 |
| Rv1432_day32 | 0.692 | 0.426 |
| Rv1565c_day32 | -1.136 | 1.978 |
| secA2_input | -0.955 | 1.85 |
| delta_Rv3594 | -0.561 | -0.136 |
| delta_Rv3717 | 0.466 | -0.409 |
| delta_Rv3811 | 0.474 | -0.201 |
| delta_Rv0954 | -0.557 | 0.828 |
| PonA1 | 1.163 | 0.177 |
| EccD1_KO | -1.187 | -1.727 |
| EspI_KO | -2.028 | -1.931 |
| PE35_KO | -1.762 | -1.248 |
| PPE68_KO | -2.176 | -1.017 |
| glycerol2 | -0.39 | 0.422 |
| lignocerate | 0.0 | 0.559 |
| oleate | -0.109 | -0.903 |
| phosphatidylcholine | -0.297 | 0.172 |
| acetate | -0.52 | 0.321 |
| glucAc | 0.224 | 0.587 |
| Rv0950ko | 0.169 | 0.066 |
| Rv1096ko | 1.098 | 0.709 |
| Rv3684ko | 0.734 | -0.072 |
| delta_otsA_trehalose | 0.66 | 1.156 |