Top 10 genes with highest correlation to Rv0912/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1128c/- | (cc=0.5522) | info on Rv1128c/- |
| Rv2857c/- | (cc=0.4605) | info on Rv2857c/- |
| Rv1664/pks9 | (cc=0.4585) | info on Rv1664/pks9 |
| Rv1252c/lprE | (cc=0.458) | info on Rv1252c/lprE |
| Rv1496/- | (cc=0.4551) | info on Rv1496/- |
| Rv3036c/TB22.2 | (cc=0.4456) | info on Rv3036c/TB22.2 |
| Rv0844c/narL | (cc=0.4401) | info on Rv0844c/narL |
| Rv0460/- | (cc=0.4316) | info on Rv0460/- |
| Rv0478/deoC | (cc=0.4299) | info on Rv0478/deoC |
| Rv1269c/- | (cc=0.4219) | info on Rv1269c/- |
Correlation of Rv0912/- with Rv1664/pks9
Normalized LFCs for Rv0912/-:
(description and provenance of datasets)
| Rv0912/- | Rv1664/pks9 | |
| Fe_supp_jason_reseq | 1.23 | 0.611 |
| low_pH_jason_reseq | -0.716 | 0.045 |
| NO_jason_reseq | -2.145 | 0.142 |
| B6_jason_reseq | -1.293 | -0.828 |
| MHCII_jason_reseq | 1.3 | -0.823 |
| Isoniazid02 | 1.927 | -0.615 |
| Rifampicin4 | 1.026 | 0.317 |
| Ethambutol3 | -0.261 | -0.916 |
| Meropenem3 | 0.715 | -0.43 |
| Vancomycin16 | 1.239 | -0.066 |
| Rv2680_day32 | 1.974 | -0.348 |
| H37Rv_KO_MarP | -1.29 | 0.185 |
| hypoxia_3wks | 0.1 | 0.1 |
| hypoxia_6wks | -0.555 | -0.109 |
| glycerol | 0.638 | 0.835 |
| cholesterol | 0.719 | 0.203 |
| AJ | 0.313 | -0.294 |
| Bibs02 | -1.44 | -0.642 |
| Bibs02c | -1.647 | -0.735 |
| BL6 | 2.355 | 0.357 |
| BL6a | 0.405 | 0.426 |
| BXD01 | 1.431 | 0.843 |
| BXD010 | 0.86 | 0.699 |
| BXD011 | 0.026 | 0.761 |
| BXD03 | -1.254 | 0.258 |
| BXD04 | 0.705 | 0.914 |
| BXD05 | 1.693 | 1.375 |
| BXD06 | 0.249 | 0.775 |
| BXD07 | 1.32 | 0.961 |
| BXD08 | 0.249 | 0.75 |
| BXD09 | 0.214 | 0.524 |
| CAST | -1.278 | -0.215 |
| CCcont | 1.774 | 0.618 |
| DS01 | -0.099 | 0.33 |
| DS02 | 0.129 | 0.246 |
| DS04 | -0.883 | 0.597 |
| DS0c | 2.305 | 0.717 |
| GP01 | 2.025 | 1.902 |
| GP02 | 3.073 | -0.078 |
| GP0c | 2.29 | 0.564 |
| NOD | -0.63 | -0.21 |
| NZO | -0.845 | -0.061 |
| PWK | 0.078 | -0.315 |
| H37Rv_KO_CtpC | 1.494 | 0.828 |
| H37Rv_KO_CtpD | 3.216 | 1.22 |
| H37Rv_KO_Rv1272 | 1.694 | 1.456 |
| H37Rv_KO_SugABC | -1.2 | 1.39 |
| H37Rv_KO_MbtN | 0.211 | 0.294 |
| Trans05 | 0.615 | 1.335 |
| macrophage_unactivated | 2.383 | 0.997 |
| IL1 | 1.824 | 0.866 |
| Rapamycin | 0.915 | 1.182 |
| Tcell | -0.049 | 1.105 |
| GMCSF | 1.97 | 1.017 |
| IFNab | 1.708 | 0.955 |
| IFNg | 1.227 | 0.906 |
| IFNg_GMCSF1 | 0.273 | 0.525 |
| Rv1432_day32 | 0.875 | -0.142 |
| Rv1565c_day32 | 0.0 | 0.531 |
| secA2_input | -0.238 | -0.65 |
| delta_Rv3594 | -0.154 | -0.311 |
| delta_Rv3717 | -0.038 | -1.008 |
| delta_Rv3811 | -0.863 | -0.47 |
| delta_Rv0954 | -3.64 | -0.74 |
| PonA1 | -1.319 | -0.744 |
| EccD1_KO | -0.125 | -0.549 |
| EspI_KO | -0.163 | -0.935 |
| PE35_KO | -0.195 | -0.563 |
| PPE68_KO | -0.374 | -0.454 |
| glycerol2 | 0.036 | -0.862 |
| lignocerate | -0.144 | -0.721 |
| oleate | -0.485 | -0.364 |
| phosphatidylcholine | -0.151 | -0.623 |
| acetate | -0.662 | -0.806 |
| glucAc | -0.308 | -0.808 |
| Rv0950ko | 0.0 | -0.371 |
| Rv1096ko | 1.279 | 0.277 |
| Rv3684ko | 2.414 | -0.665 |
| delta_otsA_trehalose | 0.678 | 1.396 |