Top 10 genes with highest correlation to Rv0912/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1128c/- | (cc=0.5522) | info on Rv1128c/- |
| Rv2857c/- | (cc=0.4605) | info on Rv2857c/- |
| Rv1664/pks9 | (cc=0.4585) | info on Rv1664/pks9 |
| Rv1252c/lprE | (cc=0.458) | info on Rv1252c/lprE |
| Rv1496/- | (cc=0.4551) | info on Rv1496/- |
| Rv3036c/TB22.2 | (cc=0.4456) | info on Rv3036c/TB22.2 |
| Rv0844c/narL | (cc=0.4401) | info on Rv0844c/narL |
| Rv0460/- | (cc=0.4316) | info on Rv0460/- |
| Rv0478/deoC | (cc=0.4299) | info on Rv0478/deoC |
| Rv1269c/- | (cc=0.4219) | info on Rv1269c/- |
Correlation of Rv0912/- with Rv0478/deoC
Normalized LFCs for Rv0912/-:
(description and provenance of datasets)
| Rv0912/- | Rv0478/deoC | |
| Fe_supp_jason_reseq | 1.23 | 0.15 |
| low_pH_jason_reseq | -0.716 | -0.731 |
| NO_jason_reseq | -2.145 | -2.142 |
| B6_jason_reseq | -1.293 | 1.559 |
| MHCII_jason_reseq | 1.3 | -0.517 |
| Isoniazid02 | 1.927 | 3.194 |
| Rifampicin4 | 1.026 | 0.964 |
| Ethambutol3 | -0.261 | 3.822 |
| Meropenem3 | 0.715 | -0.371 |
| Vancomycin16 | 1.239 | -0.669 |
| Rv2680_day32 | 1.974 | 0.062 |
| H37Rv_KO_MarP | -1.29 | 0.535 |
| hypoxia_3wks | 0.1 | -0.447 |
| hypoxia_6wks | -0.555 | 0.246 |
| glycerol | 0.638 | 0.641 |
| cholesterol | 0.719 | 0.423 |
| AJ | 0.313 | -0.75 |
| Bibs02 | -1.44 | -0.935 |
| Bibs02c | -1.647 | -0.629 |
| BL6 | 2.355 | 1.041 |
| BL6a | 0.405 | 0.99 |
| BXD01 | 1.431 | 1.893 |
| BXD010 | 0.86 | 1.964 |
| BXD011 | 0.026 | 1.974 |
| BXD03 | -1.254 | 1.121 |
| BXD04 | 0.705 | 1.2 |
| BXD05 | 1.693 | 1.063 |
| BXD06 | 0.249 | 1.782 |
| BXD07 | 1.32 | 1.264 |
| BXD08 | 0.249 | 2.159 |
| BXD09 | 0.214 | 1.298 |
| CAST | -1.278 | -1.555 |
| CCcont | 1.774 | 0.807 |
| DS01 | -0.099 | 0.116 |
| DS02 | 0.129 | -1.468 |
| DS04 | -0.883 | -0.888 |
| DS0c | 2.305 | 1.106 |
| GP01 | 2.025 | 0.041 |
| GP02 | 3.073 | 0.398 |
| GP0c | 2.29 | 0.958 |
| NOD | -0.63 | -2.278 |
| NZO | -0.845 | -0.812 |
| PWK | 0.078 | -2.269 |
| H37Rv_KO_CtpC | 1.494 | 0.76 |
| H37Rv_KO_CtpD | 3.216 | 1.284 |
| H37Rv_KO_Rv1272 | 1.694 | 0.047 |
| H37Rv_KO_SugABC | -1.2 | -2.057 |
| H37Rv_KO_MbtN | 0.211 | -1.459 |
| Trans05 | 0.615 | -0.947 |
| macrophage_unactivated | 2.383 | 0.3 |
| IL1 | 1.824 | -0.836 |
| Rapamycin | 0.915 | 0.292 |
| Tcell | -0.049 | -0.567 |
| GMCSF | 1.97 | 0.219 |
| IFNab | 1.708 | 0.81 |
| IFNg | 1.227 | 1.395 |
| IFNg_GMCSF1 | 0.273 | 0.123 |
| Rv1432_day32 | 0.875 | 0.675 |
| Rv1565c_day32 | 0.0 | -0.191 |
| secA2_input | -0.238 | 1.068 |
| delta_Rv3594 | -0.154 | -0.505 |
| delta_Rv3717 | -0.038 | -0.281 |
| delta_Rv3811 | -0.863 | -2.55 |
| delta_Rv0954 | -3.64 | -1.313 |
| PonA1 | -1.319 | -3.114 |
| EccD1_KO | -0.125 | -1.059 |
| EspI_KO | -0.163 | -2.647 |
| PE35_KO | -0.195 | -0.758 |
| PPE68_KO | -0.374 | -1.533 |
| glycerol2 | 0.036 | -0.796 |
| lignocerate | -0.144 | 0.062 |
| oleate | -0.485 | -0.532 |
| phosphatidylcholine | -0.151 | -0.724 |
| acetate | -0.662 | 0.697 |
| glucAc | -0.308 | 0.321 |
| Rv0950ko | 0.0 | 0.353 |
| Rv1096ko | 1.279 | 2.147 |
| Rv3684ko | 2.414 | 0.213 |
| delta_otsA_trehalose | 0.678 | -1.884 |