Top 10 genes with highest correlation to Rv0860/fadB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0859/fadA | (cc=0.7582) | info on Rv0859/fadA |
| Rv3261/fbiA | (cc=0.6949) | info on Rv3261/fbiA |
| Rv1173/fbiC | (cc=0.6757) | info on Rv1173/fbiC |
| Rv2983/- | (cc=0.6573) | info on Rv2983/- |
| Rv0998/- | (cc=0.5955) | info on Rv0998/- |
| Rv1324/- | (cc=0.5595) | info on Rv1324/- |
| Rv1432/- | (cc=0.5361) | info on Rv1432/- |
| Rv3262/fbiB | (cc=0.5299) | info on Rv3262/fbiB |
| Rv3410c/guaB3 | (cc=0.5244) | info on Rv3410c/guaB3 |
| Rv0467/icl1 | (cc=0.5085) | info on Rv0467/icl1 |
Correlation of Rv0860/fadB with Rv2983/-
Normalized LFCs for Rv0860/fadB:
(description and provenance of datasets)
| Rv0860/fadB | Rv2983/- | |
| Fe_supp_jason_reseq | -0.38 | 0.218 |
| low_pH_jason_reseq | -0.403 | 0.0 |
| NO_jason_reseq | -0.302 | 0.0 |
| B6_jason_reseq | -0.421 | 0.292 |
| MHCII_jason_reseq | -0.37 | 0.135 |
| Isoniazid02 | 2.041 | 2.89 |
| Rifampicin4 | 0.712 | 2.142 |
| Ethambutol3 | 2.004 | 1.249 |
| Meropenem3 | 0.379 | 0.189 |
| Vancomycin16 | -0.175 | 2.183 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.0 | 1.112 |
| hypoxia_3wks | 0.347 | -0.502 |
| hypoxia_6wks | -0.194 | -0.549 |
| glycerol | 1.647 | 0.856 |
| cholesterol | 1.468 | 1.504 |
| AJ | 0.0 | 0.232 |
| Bibs02 | 0.592 | 0.0 |
| Bibs02c | 0.0 | 0.209 |
| BL6 | -0.125 | 0.0 |
| BL6a | 0.181 | 0.0 |
| BXD01 | -0.13 | 0.0 |
| BXD010 | -0.128 | 0.0 |
| BXD011 | -0.127 | 0.0 |
| BXD03 | -0.135 | 0.0 |
| BXD04 | -0.124 | 0.0 |
| BXD05 | -0.135 | 0.135 |
| BXD06 | 0.0 | 0.133 |
| BXD07 | -0.138 | 0.0 |
| BXD08 | -0.133 | 0.0 |
| BXD09 | -0.14 | 0.0 |
| CAST | 0.0 | 0.0 |
| CCcont | 1.617 | 1.082 |
| DS01 | 2.123 | 1.947 |
| DS02 | 0.548 | 0.0 |
| DS04 | 0.883 | 0.194 |
| DS0c | 2.349 | 0.596 |
| GP01 | -0.099 | 0.0 |
| GP02 | -0.083 | 0.0 |
| GP0c | -0.13 | 0.0 |
| NOD | 0.205 | 0.0 |
| NZO | -0.199 | 0.0 |
| PWK | -0.196 | 0.0 |
| H37Rv_KO_CtpC | 0.148 | 0.0 |
| H37Rv_KO_CtpD | 0.0 | 0.127 |
| H37Rv_KO_Rv1272 | 0.0 | 0.0 |
| H37Rv_KO_SugABC | 0.509 | 0.099 |
| H37Rv_KO_MbtN | 1.335 | 0.0 |
| Trans05 | -0.131 | 0.0 |
| macrophage_unactivated | 0.65 | 0.0 |
| IL1 | -0.341 | 0.0 |
| Rapamycin | -0.353 | 0.0 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.283 | 0.0 |
| IFNab | -0.348 | 0.0 |
| IFNg | -0.644 | 0.0 |
| IFNg_GMCSF1 | -0.757 | 0.0 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.415 | 0.0 |
| secA2_input | -0.429 | -0.485 |
| delta_Rv3594 | 1.297 | 1.811 |
| delta_Rv3717 | 0.0 | 0.0 |
| delta_Rv3811 | 1.181 | 0.934 |
| delta_Rv0954 | 1.875 | 0.811 |
| PonA1 | -0.238 | 1.367 |
| EccD1_KO | 0.168 | -0.664 |
| EspI_KO | 1.146 | -1.243 |
| PE35_KO | 1.059 | 1.52 |
| PPE68_KO | 0.32 | 1.667 |
| glycerol2 | -0.914 | -1.297 |
| lignocerate | -1.218 | -2.345 |
| oleate | -2.836 | -2.358 |
| phosphatidylcholine | -1.311 | -2.697 |
| acetate | -0.482 | -1.102 |
| glucAc | -0.18 | -1.49 |
| Rv0950ko | -1.936 | -1.294 |
| Rv1096ko | -1.764 | -0.256 |
| Rv3684ko | -1.241 | -0.727 |
| delta_otsA_trehalose | -1.883 | -0.111 |