TnSeqCorr

Top 10 genes with highest correlation to Rv0860/fadB:

update plotcorrelationlink to info on gene
Rv0859/fadA (cc=0.7582) info on Rv0859/fadA
Rv3261/fbiA (cc=0.6949) info on Rv3261/fbiA
Rv1173/fbiC (cc=0.6757) info on Rv1173/fbiC
Rv2983/- (cc=0.6573) info on Rv2983/-
Rv0998/- (cc=0.5955) info on Rv0998/-
Rv1324/- (cc=0.5595) info on Rv1324/-
Rv1432/- (cc=0.5361) info on Rv1432/-
Rv3262/fbiB (cc=0.5299) info on Rv3262/fbiB
Rv3410c/guaB3 (cc=0.5244) info on Rv3410c/guaB3
Rv0467/icl1 (cc=0.5085) info on Rv0467/icl1

Correlation of Rv0860/fadB with Rv0859/fadA

Normalized LFCs for Rv0860/fadB:
(description and provenance of datasets)
Rv0860/fadBRv0859/fadA
Fe_supp_jason_reseq

-0.38

-0.688

low_pH_jason_reseq

-0.403

-0.877

NO_jason_reseq

-0.302

-2.793

B6_jason_reseq

-0.421

-1.334

MHCII_jason_reseq

-0.37

-0.512

Isoniazid02

2.041

1.288

Rifampicin4

0.712

0.157

Ethambutol3

2.004

0.37

Meropenem3

0.379

-0.509

Vancomycin16

-0.175

-0.499

Rv2680_day32

0.0

-0.554

H37Rv_KO_MarP

0.0

-0.384

hypoxia_3wks

0.347

1.049

hypoxia_6wks

-0.194

-1.075

glycerol

1.647

2.817

cholesterol

1.468

2.515

AJ

0.0

-0.751

Bibs02

0.592

-0.775

Bibs02c

0.0

0.629

BL6

-0.125

-0.187

BL6a

0.181

0.973

BXD01

-0.13

-0.552

BXD010

-0.128

-0.543

BXD011

-0.127

-0.412

BXD03

-0.135

-0.573

BXD04

-0.124

-0.524

BXD05

-0.135

-0.314

BXD06

0.0

-0.311

BXD07

-0.138

-0.323

BXD08

-0.133

-0.431

BXD09

-0.14

-0.328

CAST

0.0

-0.344

CCcont

1.617

2.961

DS01

2.123

2.421

DS02

0.548

0.414

DS04

0.883

1.938

DS0c

2.349

2.637

GP01

-0.099

-0.418

GP02

-0.083

-0.353

GP0c

-0.13

-0.551

NOD

0.205

-0.335

NZO

-0.199

-0.845

PWK

-0.196

-0.635

H37Rv_KO_CtpC

0.148

-0.526

H37Rv_KO_CtpD

0.0

0.0

H37Rv_KO_Rv1272

0.0

-0.102

H37Rv_KO_SugABC

0.509

0.817

H37Rv_KO_MbtN

1.335

0.362

Trans05

-0.131

-0.423

macrophage_unactivated

0.65

0.915

IL1

-0.341

-1.077

Rapamycin

-0.353

-1.114

Tcell

0.0

-1.183

GMCSF

0.283

-0.449

IFNab

-0.348

-0.514

IFNg

-0.644

-0.703

IFNg_GMCSF1

-0.757

-1.141

Rv1432_day32

0.0

0.0

Rv1565c_day32

0.415

-0.559

secA2_input

-0.429

0.878

delta_Rv3594

1.297

2.896

delta_Rv3717

0.0

0.165

delta_Rv3811

1.181

2.391

delta_Rv0954

1.875

3.509

PonA1

-0.238

0.223

EccD1_KO

0.168

0.395

EspI_KO

1.146

1.609

PE35_KO

1.059

1.324

PPE68_KO

0.32

1.805

glycerol2

-0.914

0.528

lignocerate

-1.218

-0.666

oleate

-2.836

-3.56

phosphatidylcholine

-1.311

-0.265

acetate

-0.482

2.937

glucAc

-0.18

1.171

Rv0950ko

-1.936

-2.237

Rv1096ko

-1.764

-3.372

Rv3684ko

-1.241

-1.985

delta_otsA_trehalose

-1.883

-0.39