Top 10 genes with highest correlation to Rv0854/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3198A/- | (cc=0.5392) | info on Rv3198A/- |
| Rv3172c/- | (cc=0.468) | info on Rv3172c/- |
| Rv2078/- | (cc=0.4602) | info on Rv2078/- |
| Rv3747/- | (cc=0.4517) | info on Rv3747/- |
| Rv2127/ansP1 | (cc=0.4333) | info on Rv2127/ansP1 |
| Rv3510c/- | (cc=0.4218) | info on Rv3510c/- |
| Rv0261c/narK3 | (cc=0.413) | info on Rv0261c/narK3 |
| Rv2142c/parE2 | (cc=0.4099) | info on Rv2142c/parE2 |
| Rv1814/erg3 | (cc=0.4061) | info on Rv1814/erg3 |
| Rv0323c/- | (cc=0.3991) | info on Rv0323c/- |
Correlation of Rv0854/- with Rv3172c/-
Normalized LFCs for Rv0854/-:
(description and provenance of datasets)
| Rv0854/- | Rv3172c/- | |
| Fe_supp_jason_reseq | -0.148 | 0.672 |
| low_pH_jason_reseq | -1.129 | -0.617 |
| NO_jason_reseq | -1.034 | 0.32 |
| B6_jason_reseq | -0.1 | 0.496 |
| MHCII_jason_reseq | -0.222 | 0.991 |
| Isoniazid02 | 1.314 | 1.98 |
| Rifampicin4 | -0.872 | 0.032 |
| Ethambutol3 | 0.925 | 1.927 |
| Meropenem3 | -0.44 | -0.966 |
| Vancomycin16 | -0.151 | -0.485 |
| Rv2680_day32 | 0.94 | 0.157 |
| H37Rv_KO_MarP | -0.154 | 0.08 |
| hypoxia_3wks | 0.148 | -0.423 |
| hypoxia_6wks | 0.134 | -0.459 |
| glycerol | -1.821 | -2.279 |
| cholesterol | -0.795 | -0.317 |
| AJ | -0.087 | -0.983 |
| Bibs02 | 0.833 | -0.061 |
| Bibs02c | -0.449 | 0.055 |
| BL6 | 0.876 | 0.471 |
| BL6a | -0.08 | 0.303 |
| BXD01 | 0.588 | 0.25 |
| BXD010 | 0.098 | -0.433 |
| BXD011 | 0.27 | -0.087 |
| BXD03 | -0.313 | 0.324 |
| BXD04 | 0.449 | -0.119 |
| BXD05 | 0.202 | 0.438 |
| BXD06 | 0.025 | 0.421 |
| BXD07 | 0.194 | -0.216 |
| BXD08 | -0.087 | 0.445 |
| BXD09 | -0.204 | 0.124 |
| CAST | -0.167 | 0.118 |
| CCcont | 0.136 | 0.662 |
| DS01 | 0.625 | 0.106 |
| DS02 | 0.299 | -0.547 |
| DS04 | -0.596 | -0.052 |
| DS0c | -0.415 | -0.338 |
| GP01 | 0.574 | 0.644 |
| GP02 | -1.037 | -0.369 |
| GP0c | -0.154 | -0.089 |
| NOD | 0.586 | 0.317 |
| NZO | -0.468 | -0.387 |
| PWK | -0.142 | -0.629 |
| H37Rv_KO_CtpC | -0.019 | 0.293 |
| H37Rv_KO_CtpD | -0.194 | 0.472 |
| H37Rv_KO_Rv1272 | -0.682 | 0.141 |
| H37Rv_KO_SugABC | 0.585 | -0.43 |
| H37Rv_KO_MbtN | 0.588 | 0.0 |
| Trans05 | 0.097 | 0.858 |
| macrophage_unactivated | 0.483 | -0.341 |
| IL1 | -0.294 | -0.635 |
| Rapamycin | 0.135 | 0.132 |
| Tcell | 0.446 | 0.378 |
| GMCSF | -0.726 | 0.0 |
| IFNab | 0.121 | -0.354 |
| IFNg | 0.374 | 0.203 |
| IFNg_GMCSF1 | -0.129 | 1.351 |
| Rv1432_day32 | 0.645 | -0.162 |
| Rv1565c_day32 | 0.521 | -0.153 |
| secA2_input | 0.551 | -0.042 |
| delta_Rv3594 | 0.043 | -0.493 |
| delta_Rv3717 | 0.137 | -0.773 |
| delta_Rv3811 | -0.929 | -0.375 |
| delta_Rv0954 | -0.664 | -0.447 |
| PonA1 | -0.106 | -0.532 |
| EccD1_KO | -0.342 | -0.493 |
| EspI_KO | -0.599 | -0.359 |
| PE35_KO | 0.082 | 0.423 |
| PPE68_KO | 0.134 | 0.56 |
| glycerol2 | 1.454 | 0.5 |
| lignocerate | 1.069 | 1.199 |
| oleate | 0.59 | -0.191 |
| phosphatidylcholine | 1.225 | 0.725 |
| acetate | 0.367 | 0.918 |
| glucAc | 0.481 | 0.955 |
| Rv0950ko | 1.004 | -0.769 |
| Rv1096ko | 0.636 | -0.341 |
| Rv3684ko | -0.665 | -0.521 |
| delta_otsA_trehalose | 0.135 | -0.074 |