Top 10 genes with highest correlation to Rv0854/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3198A/- | (cc=0.5392) | info on Rv3198A/- |
| Rv3172c/- | (cc=0.468) | info on Rv3172c/- |
| Rv2078/- | (cc=0.4602) | info on Rv2078/- |
| Rv3747/- | (cc=0.4517) | info on Rv3747/- |
| Rv2127/ansP1 | (cc=0.4333) | info on Rv2127/ansP1 |
| Rv3510c/- | (cc=0.4218) | info on Rv3510c/- |
| Rv0261c/narK3 | (cc=0.413) | info on Rv0261c/narK3 |
| Rv2142c/parE2 | (cc=0.4099) | info on Rv2142c/parE2 |
| Rv1814/erg3 | (cc=0.4061) | info on Rv1814/erg3 |
| Rv0323c/- | (cc=0.3991) | info on Rv0323c/- |
Correlation of Rv0854/- with Rv0261c/narK3
Normalized LFCs for Rv0854/-:
(description and provenance of datasets)
| Rv0854/- | Rv0261c/narK3 | |
| Fe_supp_jason_reseq | -0.148 | -1.435 |
| low_pH_jason_reseq | -1.129 | 0.273 |
| NO_jason_reseq | -1.034 | -0.213 |
| B6_jason_reseq | -0.1 | -0.184 |
| MHCII_jason_reseq | -0.222 | 0.374 |
| Isoniazid02 | 1.314 | 0.406 |
| Rifampicin4 | -0.872 | -0.623 |
| Ethambutol3 | 0.925 | -0.058 |
| Meropenem3 | -0.44 | 0.0 |
| Vancomycin16 | -0.151 | 0.358 |
| Rv2680_day32 | 0.94 | -0.267 |
| H37Rv_KO_MarP | -0.154 | 0.0 |
| hypoxia_3wks | 0.148 | -0.574 |
| hypoxia_6wks | 0.134 | -0.186 |
| glycerol | -1.821 | -0.551 |
| cholesterol | -0.795 | -0.246 |
| AJ | -0.087 | -0.899 |
| Bibs02 | 0.833 | 0.736 |
| Bibs02c | -0.449 | -0.781 |
| BL6 | 0.876 | 0.039 |
| BL6a | -0.08 | -0.957 |
| BXD01 | 0.588 | -0.159 |
| BXD010 | 0.098 | -0.458 |
| BXD011 | 0.27 | -0.233 |
| BXD03 | -0.313 | -0.722 |
| BXD04 | 0.449 | 0.225 |
| BXD05 | 0.202 | -0.65 |
| BXD06 | 0.025 | -0.147 |
| BXD07 | 0.194 | -0.219 |
| BXD08 | -0.087 | 0.526 |
| BXD09 | -0.204 | -0.205 |
| CAST | -0.167 | 0.072 |
| CCcont | 0.136 | -0.147 |
| DS01 | 0.625 | 0.098 |
| DS02 | 0.299 | -0.14 |
| DS04 | -0.596 | 0.06 |
| DS0c | -0.415 | -0.214 |
| GP01 | 0.574 | 0.0 |
| GP02 | -1.037 | 0.567 |
| GP0c | -0.154 | -0.409 |
| NOD | 0.586 | -0.553 |
| NZO | -0.468 | -0.6 |
| PWK | -0.142 | 0.215 |
| H37Rv_KO_CtpC | -0.019 | 0.131 |
| H37Rv_KO_CtpD | -0.194 | -1.086 |
| H37Rv_KO_Rv1272 | -0.682 | 0.398 |
| H37Rv_KO_SugABC | 0.585 | 0.041 |
| H37Rv_KO_MbtN | 0.588 | -0.836 |
| Trans05 | 0.097 | 0.359 |
| macrophage_unactivated | 0.483 | 0.129 |
| IL1 | -0.294 | -0.19 |
| Rapamycin | 0.135 | -0.62 |
| Tcell | 0.446 | 0.199 |
| GMCSF | -0.726 | -0.795 |
| IFNab | 0.121 | -0.611 |
| IFNg | 0.374 | 0.714 |
| IFNg_GMCSF1 | -0.129 | 0.255 |
| Rv1432_day32 | 0.645 | 0.441 |
| Rv1565c_day32 | 0.521 | 1.188 |
| secA2_input | 0.551 | -0.116 |
| delta_Rv3594 | 0.043 | -0.373 |
| delta_Rv3717 | 0.137 | -0.892 |
| delta_Rv3811 | -0.929 | -0.596 |
| delta_Rv0954 | -0.664 | -1.424 |
| PonA1 | -0.106 | -0.873 |
| EccD1_KO | -0.342 | -1.105 |
| EspI_KO | -0.599 | -0.759 |
| PE35_KO | 0.082 | -0.438 |
| PPE68_KO | 0.134 | -0.234 |
| glycerol2 | 1.454 | 1.006 |
| lignocerate | 1.069 | 1.456 |
| oleate | 0.59 | 0.496 |
| phosphatidylcholine | 1.225 | 1.248 |
| acetate | 0.367 | 0.582 |
| glucAc | 0.481 | 0.637 |
| Rv0950ko | 1.004 | -0.163 |
| Rv1096ko | 0.636 | 0.863 |
| Rv3684ko | -0.665 | 0.596 |
| delta_otsA_trehalose | 0.135 | -0.247 |