Top 10 genes with highest correlation to Rv0850/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1160/mutT2 | (cc=0.7889) | info on Rv1160/mutT2 |
| Rv3395c/- | (cc=0.7365) | info on Rv3395c/- |
| Rv3354/- | (cc=0.7319) | info on Rv3354/- |
| Rv0089/- | (cc=0.7232) | info on Rv0089/- |
| Rv1974/- | (cc=0.723) | info on Rv1974/- |
| Rv1181/pks4 | (cc=0.7026) | info on Rv1181/pks4 |
| Rv0887c/- | (cc=0.7014) | info on Rv0887c/- |
| Rv1378c/- | (cc=0.6772) | info on Rv1378c/- |
| Rv2633c/- | (cc=0.6767) | info on Rv2633c/- |
| Rv2028c/- | (cc=0.6617) | info on Rv2028c/- |
Correlation of Rv0850/- with Rv1181/pks4
Normalized LFCs for Rv0850/-:
(description and provenance of datasets)
| Rv0850/- | Rv1181/pks4 | |
| Fe_supp_jason_reseq | -1.039 | -0.508 |
| low_pH_jason_reseq | 1.621 | 0.179 |
| NO_jason_reseq | -0.575 | -0.564 |
| B6_jason_reseq | 1.642 | 1.952 |
| MHCII_jason_reseq | 1.231 | 2.203 |
| Isoniazid02 | 0.534 | 0.244 |
| Rifampicin4 | -0.671 | -0.165 |
| Ethambutol3 | -0.415 | 0.687 |
| Meropenem3 | -0.297 | 0.137 |
| Vancomycin16 | 0.05 | 0.255 |
| Rv2680_day32 | 0.109 | -0.253 |
| H37Rv_KO_MarP | 0.662 | 0.21 |
| hypoxia_3wks | -1.882 | -0.283 |
| hypoxia_6wks | -0.453 | -0.088 |
| glycerol | 0.638 | 0.721 |
| cholesterol | -1.006 | 0.512 |
| AJ | -0.047 | 0.508 |
| Bibs02 | 0.054 | 0.011 |
| Bibs02c | 1.537 | -0.035 |
| BL6 | -2.459 | -1.076 |
| BL6a | 0.948 | -0.562 |
| BXD01 | -2.649 | -2.015 |
| BXD010 | -2.697 | -0.893 |
| BXD011 | -2.143 | -1.018 |
| BXD03 | -2.275 | -1.344 |
| BXD04 | -2.7 | -1.303 |
| BXD05 | -2.834 | -0.967 |
| BXD06 | -1.533 | -1.624 |
| BXD07 | -3.265 | -1.523 |
| BXD08 | -2.704 | -1.691 |
| BXD09 | -2.959 | -1.545 |
| CAST | 0.514 | -0.025 |
| CCcont | -2.008 | -1.157 |
| DS01 | 1.009 | 0.026 |
| DS02 | 0.572 | -0.098 |
| DS04 | 0.02 | -0.468 |
| DS0c | -0.479 | -0.061 |
| GP01 | -1.941 | -1.655 |
| GP02 | -1.962 | -1.466 |
| GP0c | -0.571 | -1.95 |
| NOD | -0.361 | 0.259 |
| NZO | 0.116 | 0.107 |
| PWK | -0.183 | 0.638 |
| H37Rv_KO_CtpC | -2.305 | -1.24 |
| H37Rv_KO_CtpD | -1.75 | -1.259 |
| H37Rv_KO_Rv1272 | -2.444 | -1.596 |
| H37Rv_KO_SugABC | -0.362 | -0.505 |
| H37Rv_KO_MbtN | -2.25 | -0.472 |
| Trans05 | -0.354 | -0.869 |
| macrophage_unactivated | -2.91 | -1.973 |
| IL1 | -2.515 | -0.169 |
| Rapamycin | -2.179 | 0.034 |
| Tcell | -3.526 | -2.512 |
| GMCSF | -3.335 | -1.838 |
| IFNab | -2.564 | -0.822 |
| IFNg | -1.109 | -0.764 |
| IFNg_GMCSF1 | -2.231 | -0.77 |
| Rv1432_day32 | -1.413 | -0.459 |
| Rv1565c_day32 | -1.136 | -0.63 |
| secA2_input | -3.397 | -0.373 |
| delta_Rv3594 | 1.722 | 0.416 |
| delta_Rv3717 | 1.339 | -0.106 |
| delta_Rv3811 | 0.848 | 0.193 |
| delta_Rv0954 | 2.122 | -0.305 |
| PonA1 | -0.274 | -0.235 |
| EccD1_KO | -1.174 | -0.776 |
| EspI_KO | -0.673 | -0.673 |
| PE35_KO | -1.348 | -0.16 |
| PPE68_KO | -0.982 | -0.269 |
| glycerol2 | 2.413 | -0.144 |
| lignocerate | 2.345 | 1.277 |
| oleate | 0.961 | -0.865 |
| phosphatidylcholine | 1.594 | -0.024 |
| acetate | 2.469 | 0.309 |
| glucAc | 1.638 | 0.363 |
| Rv0950ko | -0.706 | -0.084 |
| Rv1096ko | 0.609 | 1.294 |
| Rv3684ko | 0.229 | 0.265 |
| delta_otsA_trehalose | -0.4 | 1.196 |