Top 10 genes with highest correlation to Rv0846c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1453/- | (cc=0.6978) | info on Rv1453/- |
| Rv2032/acg | (cc=0.6387) | info on Rv2032/acg |
| Rv3295/- | (cc=0.6243) | info on Rv3295/- |
| Rv1182/papA3 | (cc=0.6159) | info on Rv1182/papA3 |
| Rv2063A/mazF7 | (cc=0.5895) | info on Rv2063A/mazF7 |
| Rv2636/- | (cc=0.5805) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.5801) | info on Rv1180/pks3 |
| Rv1815/- | (cc=0.5732) | info on Rv1815/- |
| Rv1843c/guaB1 | (cc=0.5639) | info on Rv1843c/guaB1 |
| Rv0840c/pip | (cc=0.5592) | info on Rv0840c/pip |
Correlation of Rv0846c/- with Rv1180/pks3
Normalized LFCs for Rv0846c/-:
(description and provenance of datasets)
| Rv0846c/- | Rv1180/pks3 | |
| Fe_supp_jason_reseq | -0.444 | -0.279 |
| low_pH_jason_reseq | -0.547 | 2.652 |
| NO_jason_reseq | -0.404 | 0.0 |
| B6_jason_reseq | 1.345 | 2.843 |
| MHCII_jason_reseq | 1.352 | 3.318 |
| Isoniazid02 | 0.8 | -0.345 |
| Rifampicin4 | -0.095 | -0.374 |
| Ethambutol3 | 0.551 | 0.176 |
| Meropenem3 | 0.041 | -0.865 |
| Vancomycin16 | 0.09 | 0.225 |
| Rv2680_day32 | 0.29 | -0.493 |
| H37Rv_KO_MarP | 0.809 | 0.415 |
| hypoxia_3wks | 0.813 | -0.319 |
| hypoxia_6wks | 1.76 | 0.234 |
| glycerol | -0.856 | -0.016 |
| cholesterol | -0.157 | 0.163 |
| AJ | 0.598 | 0.356 |
| Bibs02 | 0.695 | -0.254 |
| Bibs02c | 0.279 | 0.646 |
| BL6 | -0.501 | -2.892 |
| BL6a | -0.34 | -0.405 |
| BXD01 | -0.665 | -2.644 |
| BXD010 | -0.208 | -1.603 |
| BXD011 | 0.01 | -2.421 |
| BXD03 | 0.022 | -1.964 |
| BXD04 | -1.062 | -1.702 |
| BXD05 | 0.216 | -1.519 |
| BXD06 | -0.581 | -2.271 |
| BXD07 | -0.724 | -2.302 |
| BXD08 | -0.318 | -2.404 |
| BXD09 | -0.484 | -2.206 |
| CAST | 0.053 | 0.307 |
| CCcont | -1.231 | -2.242 |
| DS01 | 0.778 | 0.371 |
| DS02 | 0.493 | 0.298 |
| DS04 | 0.427 | 0.292 |
| DS0c | 0.035 | 0.093 |
| GP01 | -0.031 | -1.877 |
| GP02 | -0.715 | -1.623 |
| GP0c | -1.433 | -3.264 |
| NOD | 0.495 | -0.194 |
| NZO | 0.452 | 0.069 |
| PWK | -0.283 | 0.374 |
| H37Rv_KO_CtpC | -1.151 | -1.492 |
| H37Rv_KO_CtpD | 0.246 | -2.799 |
| H37Rv_KO_Rv1272 | 0.011 | -2.581 |
| H37Rv_KO_SugABC | -0.288 | -1.747 |
| H37Rv_KO_MbtN | -0.609 | -1.345 |
| Trans05 | -0.153 | -1.761 |
| macrophage_unactivated | -1.152 | -3.27 |
| IL1 | -0.854 | -2.174 |
| Rapamycin | -1.059 | -1.534 |
| Tcell | -0.587 | -3.454 |
| GMCSF | -0.428 | -2.609 |
| IFNab | -0.871 | -2.276 |
| IFNg | -1.248 | -3.175 |
| IFNg_GMCSF1 | -0.619 | -1.518 |
| Rv1432_day32 | 0.799 | 0.411 |
| Rv1565c_day32 | 0.516 | 0.692 |
| secA2_input | 0.058 | 0.944 |
| delta_Rv3594 | 0.392 | 0.2 |
| delta_Rv3717 | -0.361 | -1.016 |
| delta_Rv3811 | -0.427 | -1.142 |
| delta_Rv0954 | 0.857 | -1.262 |
| PonA1 | -0.675 | 0.077 |
| EccD1_KO | -0.329 | 1.457 |
| EspI_KO | 0.2 | -0.106 |
| PE35_KO | 1.365 | 0.694 |
| PPE68_KO | 0.71 | 0.557 |
| glycerol2 | 0.14 | -0.684 |
| lignocerate | 0.15 | 0.737 |
| oleate | 0.597 | -0.489 |
| phosphatidylcholine | 0.479 | -0.066 |
| acetate | -0.178 | -0.299 |
| glucAc | 0.804 | -0.016 |
| Rv0950ko | -0.048 | 1.227 |
| Rv1096ko | -0.63 | 0.826 |
| Rv3684ko | -0.937 | 0.419 |
| delta_otsA_trehalose | 0.803 | 0.724 |