Top 10 genes with highest correlation to Rv0841/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0691A/- | (cc=0.5986) | info on Rv0691A/- |
| Rv0421c/- | (cc=0.5873) | info on Rv0421c/- |
| Rv2125/- | (cc=0.5748) | info on Rv2125/- |
| Rv0571c/- | (cc=0.5622) | info on Rv0571c/- |
| Rv1846c/blaI | (cc=0.5606) | info on Rv1846c/blaI |
| Rv0595c/vapC4 | (cc=0.558) | info on Rv0595c/vapC4 |
| Rv0080/- | (cc=0.5481) | info on Rv0080/- |
| Rv0737/- | (cc=0.544) | info on Rv0737/- |
| Rv0379/secE2 | (cc=0.5252) | info on Rv0379/secE2 |
| Rv2344c/dgt | (cc=0.5224) | info on Rv2344c/dgt |
Correlation of Rv0841/- with Rv0595c/vapC4
Normalized LFCs for Rv0841/-:
(description and provenance of datasets)
| Rv0841/- | Rv0595c/vapC4 | |
| Fe_supp_jason_reseq | 0.941 | 0.952 |
| low_pH_jason_reseq | -2.299 | 0.918 |
| NO_jason_reseq | -0.247 | 0.522 |
| B6_jason_reseq | -0.76 | 1.072 |
| MHCII_jason_reseq | 1.021 | -0.694 |
| Isoniazid02 | -0.079 | 0.073 |
| Rifampicin4 | 0.655 | 0.417 |
| Ethambutol3 | -0.224 | 0.579 |
| Meropenem3 | 0.053 | 0.57 |
| Vancomycin16 | 0.642 | 0.645 |
| Rv2680_day32 | 0.0 | 1.429 |
| H37Rv_KO_MarP | -0.078 | 0.415 |
| hypoxia_3wks | -1.934 | -0.299 |
| hypoxia_6wks | 1.806 | -0.319 |
| glycerol | -0.756 | -0.091 |
| cholesterol | -0.456 | -0.049 |
| AJ | -1.173 | 0.114 |
| Bibs02 | 0.245 | -0.607 |
| Bibs02c | -1.428 | -0.834 |
| BL6 | -2.599 | -1.475 |
| BL6a | -3.418 | -2.101 |
| BXD01 | -2.706 | -2.684 |
| BXD010 | -2.661 | -0.361 |
| BXD011 | -2.646 | -1.833 |
| BXD03 | -2.809 | -1.16 |
| BXD04 | -1.286 | -1.763 |
| BXD05 | -2.796 | -1.799 |
| BXD06 | -2.64 | -2.013 |
| BXD07 | -2.877 | -1.722 |
| BXD08 | -2.763 | -1.214 |
| BXD09 | -2.534 | -1.599 |
| CAST | -1.448 | -0.023 |
| CCcont | -2.274 | -1.464 |
| DS01 | -1.815 | -0.157 |
| DS02 | -1.424 | -0.307 |
| DS04 | -2.256 | -1.62 |
| DS0c | -0.482 | -1.315 |
| GP01 | -0.595 | 0.821 |
| GP02 | -0.061 | -0.134 |
| GP0c | 1.083 | 0.056 |
| NOD | -2.249 | -0.343 |
| NZO | -1.202 | -0.376 |
| PWK | -1.691 | -0.277 |
| H37Rv_KO_CtpC | -1.626 | -1.097 |
| H37Rv_KO_CtpD | 0.277 | 0.059 |
| H37Rv_KO_Rv1272 | -2.93 | -0.872 |
| H37Rv_KO_SugABC | -0.434 | 0.347 |
| H37Rv_KO_MbtN | -0.792 | -1.511 |
| Trans05 | -2.715 | 0.223 |
| macrophage_unactivated | -0.701 | -0.467 |
| IL1 | -1.439 | -1.486 |
| Rapamycin | -1.488 | -0.034 |
| Tcell | -1.134 | -0.036 |
| GMCSF | -1.281 | 0.277 |
| IFNab | -1.466 | -0.203 |
| IFNg | -1.296 | -0.949 |
| IFNg_GMCSF1 | 1.386 | 0.0 |
| Rv1432_day32 | 0.18 | -0.838 |
| Rv1565c_day32 | 0.393 | -0.098 |
| secA2_input | -1.13 | 0.585 |
| delta_Rv3594 | 0.558 | 0.515 |
| delta_Rv3717 | 1.024 | 0.305 |
| delta_Rv3811 | 0.385 | 0.333 |
| delta_Rv0954 | 0.264 | 0.509 |
| PonA1 | 1.333 | 0.14 |
| EccD1_KO | 1.585 | -0.957 |
| EspI_KO | -1.851 | 0.399 |
| PE35_KO | -1.779 | -0.023 |
| PPE68_KO | -1.328 | -0.813 |
| glycerol2 | -1.297 | 0.0 |
| lignocerate | -1.128 | 0.198 |
| oleate | -1.313 | 0.421 |
| phosphatidylcholine | -1.104 | -0.387 |
| acetate | 0.459 | 0.514 |
| glucAc | 0.994 | 0.345 |
| Rv0950ko | 1.242 | -0.244 |
| Rv1096ko | 1.644 | 0.477 |
| Rv3684ko | 1.477 | 0.517 |
| delta_otsA_trehalose | 0.643 | 1.251 |