Top 10 genes with highest correlation to Rv0841/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0691A/- | (cc=0.5986) | info on Rv0691A/- |
| Rv0421c/- | (cc=0.5873) | info on Rv0421c/- |
| Rv2125/- | (cc=0.5748) | info on Rv2125/- |
| Rv0571c/- | (cc=0.5622) | info on Rv0571c/- |
| Rv1846c/blaI | (cc=0.5606) | info on Rv1846c/blaI |
| Rv0595c/vapC4 | (cc=0.558) | info on Rv0595c/vapC4 |
| Rv0080/- | (cc=0.5481) | info on Rv0080/- |
| Rv0737/- | (cc=0.544) | info on Rv0737/- |
| Rv0379/secE2 | (cc=0.5252) | info on Rv0379/secE2 |
| Rv2344c/dgt | (cc=0.5224) | info on Rv2344c/dgt |
Correlation of Rv0841/- with Rv0379/secE2
Normalized LFCs for Rv0841/-:
(description and provenance of datasets)
| Rv0841/- | Rv0379/secE2 | |
| Fe_supp_jason_reseq | 0.941 | -0.707 |
| low_pH_jason_reseq | -2.299 | -0.32 |
| NO_jason_reseq | -0.247 | 1.197 |
| B6_jason_reseq | -0.76 | -0.727 |
| MHCII_jason_reseq | 1.021 | -0.542 |
| Isoniazid02 | -0.079 | 0.799 |
| Rifampicin4 | 0.655 | 0.046 |
| Ethambutol3 | -0.224 | 1.3 |
| Meropenem3 | 0.053 | 0.272 |
| Vancomycin16 | 0.642 | 0.44 |
| Rv2680_day32 | 0.0 | -0.692 |
| H37Rv_KO_MarP | -0.078 | -0.339 |
| hypoxia_3wks | -1.934 | -1.703 |
| hypoxia_6wks | 1.806 | 0.597 |
| glycerol | -0.756 | 1.29 |
| cholesterol | -0.456 | 0.307 |
| AJ | -1.173 | 0.178 |
| Bibs02 | 0.245 | 0.943 |
| Bibs02c | -1.428 | 0.562 |
| BL6 | -2.599 | -0.753 |
| BL6a | -3.418 | -0.694 |
| BXD01 | -2.706 | -3.242 |
| BXD010 | -2.661 | -1.486 |
| BXD011 | -2.646 | -2.338 |
| BXD03 | -2.809 | -3.193 |
| BXD04 | -1.286 | -2.154 |
| BXD05 | -2.796 | -2.001 |
| BXD06 | -2.64 | -1.712 |
| BXD07 | -2.877 | -3.111 |
| BXD08 | -2.763 | -2.542 |
| BXD09 | -2.534 | -2.019 |
| CAST | -1.448 | -0.552 |
| CCcont | -2.274 | -1.958 |
| DS01 | -1.815 | 0.289 |
| DS02 | -1.424 | 0.159 |
| DS04 | -2.256 | 0.048 |
| DS0c | -0.482 | -0.13 |
| GP01 | -0.595 | -2.055 |
| GP02 | -0.061 | -2.334 |
| GP0c | 1.083 | -2.237 |
| NOD | -2.249 | -0.937 |
| NZO | -1.202 | -0.759 |
| PWK | -1.691 | 0.681 |
| H37Rv_KO_CtpC | -1.626 | -0.505 |
| H37Rv_KO_CtpD | 0.277 | -0.49 |
| H37Rv_KO_Rv1272 | -2.93 | 0.006 |
| H37Rv_KO_SugABC | -0.434 | -2.379 |
| H37Rv_KO_MbtN | -0.792 | -1.646 |
| Trans05 | -2.715 | -0.513 |
| macrophage_unactivated | -0.701 | 0.035 |
| IL1 | -1.439 | -0.392 |
| Rapamycin | -1.488 | -0.365 |
| Tcell | -1.134 | -1.039 |
| GMCSF | -1.281 | -2.521 |
| IFNab | -1.466 | -1.466 |
| IFNg | -1.296 | -1.048 |
| IFNg_GMCSF1 | 1.386 | 2.118 |
| Rv1432_day32 | 0.18 | 0.18 |
| Rv1565c_day32 | 0.393 | -0.085 |
| secA2_input | -1.13 | -1.49 |
| delta_Rv3594 | 0.558 | 0.078 |
| delta_Rv3717 | 1.024 | -1.111 |
| delta_Rv3811 | 0.385 | 0.843 |
| delta_Rv0954 | 0.264 | 1.454 |
| PonA1 | 1.333 | 0.87 |
| EccD1_KO | 1.585 | -0.02 |
| EspI_KO | -1.851 | 0.319 |
| PE35_KO | -1.779 | 0.055 |
| PPE68_KO | -1.328 | 0.32 |
| glycerol2 | -1.297 | 1.188 |
| lignocerate | -1.128 | 2.25 |
| oleate | -1.313 | 0.0 |
| phosphatidylcholine | -1.104 | 1.401 |
| acetate | 0.459 | 3.712 |
| glucAc | 0.994 | 3.12 |
| Rv0950ko | 1.242 | 3.347 |
| Rv1096ko | 1.644 | 2.925 |
| Rv3684ko | 1.477 | 2.689 |
| delta_otsA_trehalose | 0.643 | -1.235 |