Top 10 genes with highest correlation to Rv0827c/kmtR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0370c/- | (cc=0.5373) | info on Rv0370c/- |
| Rv0845/- | (cc=0.5165) | info on Rv0845/- |
| Rv0277c/vapC25 | (cc=0.5031) | info on Rv0277c/vapC25 |
| Rv1167c/- | (cc=0.4891) | info on Rv1167c/- |
| Rv3398c/idsA1 | (cc=0.4831) | info on Rv3398c/idsA1 |
| Rv1526c/- | (cc=0.4824) | info on Rv1526c/- |
| Rv2673/aftC | (cc=0.4771) | info on Rv2673/aftC |
| Rv3828c/- | (cc=0.4598) | info on Rv3828c/- |
| Rv1662/pks8 | (cc=0.4569) | info on Rv1662/pks8 |
| Rv3070/- | (cc=0.4484) | info on Rv3070/- |
Correlation of Rv0827c/kmtR with Rv2673/aftC
Normalized LFCs for Rv0827c/kmtR:
(description and provenance of datasets)
| Rv0827c/kmtR | Rv2673/aftC | |
| Fe_supp_jason_reseq | -2.06 | -0.508 |
| low_pH_jason_reseq | 1.128 | -0.201 |
| NO_jason_reseq | -0.942 | -0.483 |
| B6_jason_reseq | -2.511 | -1.314 |
| MHCII_jason_reseq | -3.0 | -1.292 |
| Isoniazid02 | -1.307 | 0.135 |
| Rifampicin4 | 0.303 | 0.0 |
| Ethambutol3 | -0.845 | -0.251 |
| Meropenem3 | -1.276 | -0.12 |
| Vancomycin16 | -0.883 | 0.0 |
| Rv2680_day32 | 0.018 | 0.0 |
| H37Rv_KO_MarP | 1.192 | -0.313 |
| hypoxia_3wks | -0.694 | -0.371 |
| hypoxia_6wks | 0.416 | 0.0 |
| glycerol | -1.401 | -0.353 |
| cholesterol | -0.766 | -0.398 |
| AJ | 0.301 | 0.0 |
| Bibs02 | 0.954 | 0.273 |
| Bibs02c | -0.629 | 0.0 |
| BL6 | 0.837 | 0.351 |
| BL6a | 0.387 | 0.154 |
| BXD01 | 0.703 | 0.365 |
| BXD010 | 0.131 | 0.099 |
| BXD011 | 1.34 | 0.817 |
| BXD03 | -0.25 | 0.536 |
| BXD04 | 0.562 | 0.185 |
| BXD05 | 0.499 | 0.292 |
| BXD06 | 0.849 | 0.374 |
| BXD07 | 0.96 | 0.549 |
| BXD08 | 0.656 | 0.527 |
| BXD09 | 1.112 | 0.477 |
| CAST | 0.48 | -0.192 |
| CCcont | 1.683 | 0.749 |
| DS01 | -1.372 | -0.197 |
| DS02 | 0.9 | -0.38 |
| DS04 | 0.304 | 0.0 |
| DS0c | 0.368 | 0.168 |
| GP01 | -1.978 | -0.271 |
| GP02 | -1.667 | -0.228 |
| GP0c | -2.605 | -0.357 |
| NOD | 0.068 | 1.715 |
| NZO | 0.63 | 0.298 |
| PWK | 0.145 | 0.983 |
| H37Rv_KO_CtpC | 3.761 | 1.582 |
| H37Rv_KO_CtpD | 1.266 | -0.221 |
| H37Rv_KO_Rv1272 | 1.942 | 0.479 |
| H37Rv_KO_SugABC | -0.63 | 0.497 |
| H37Rv_KO_MbtN | -0.289 | 0.0 |
| Trans05 | 1.185 | 1.5 |
| macrophage_unactivated | 1.288 | -1.016 |
| IL1 | -0.581 | -0.219 |
| Rapamycin | 0.347 | -0.718 |
| Tcell | 1.58 | -0.762 |
| GMCSF | 0.333 | -0.401 |
| IFNab | 1.176 | -0.46 |
| IFNg | 1.539 | 0.54 |
| IFNg_GMCSF1 | -0.962 | 0.434 |
| Rv1432_day32 | -0.763 | 0.391 |
| Rv1565c_day32 | -0.134 | 0.0 |
| secA2_input | 0.244 | -0.366 |
| delta_Rv3594 | -0.85 | 0.119 |
| delta_Rv3717 | -1.097 | -0.103 |
| delta_Rv3811 | -0.233 | -0.122 |
| delta_Rv0954 | 1.264 | 0.101 |
| PonA1 | 1.221 | -0.675 |
| EccD1_KO | 0.99 | 1.365 |
| EspI_KO | 1.526 | 0.918 |
| PE35_KO | 0.12 | 1.467 |
| PPE68_KO | 0.739 | 1.872 |
| glycerol2 | -1.473 | -0.914 |
| lignocerate | -0.48 | -0.634 |
| oleate | -1.859 | -1.754 |
| phosphatidylcholine | -0.866 | -0.913 |
| acetate | -0.048 | -1.453 |
| glucAc | 0.626 | -0.605 |
| Rv0950ko | 0.669 | 0.0 |
| Rv1096ko | -0.106 | 0.706 |
| Rv3684ko | 0.681 | 0.0 |
| delta_otsA_trehalose | 1.027 | 0.329 |