Top 10 genes with highest correlation to Rv0821c/phoY2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.6764) | info on Rv3210c/- |
| Rv3720/- | (cc=0.5788) | info on Rv3720/- |
| Rv0475/hbhA | (cc=0.5722) | info on Rv0475/hbhA |
| Rv0930/pstA1 | (cc=0.5677) | info on Rv0930/pstA1 |
| Rv3719/- | (cc=0.5669) | info on Rv3719/- |
| Rv1683/- | (cc=0.5506) | info on Rv1683/- |
| Rv3823c/mmpL8 | (cc=0.5437) | info on Rv3823c/mmpL8 |
| Rv0820/phoT | (cc=0.539) | info on Rv0820/phoT |
| Rv0309/- | (cc=0.5344) | info on Rv0309/- |
| Rv2190c/- | (cc=0.5328) | info on Rv2190c/- |
Correlation of Rv0821c/phoY2 with Rv3210c/-
Normalized LFCs for Rv0821c/phoY2:
(description and provenance of datasets)
| Rv0821c/phoY2 | Rv3210c/- | |
| Fe_supp_jason_reseq | -0.185 | 2.062 |
| low_pH_jason_reseq | 0.641 | -3.853 |
| NO_jason_reseq | -0.937 | -2.056 |
| B6_jason_reseq | 0.493 | -1.674 |
| MHCII_jason_reseq | -0.554 | -2.452 |
| Isoniazid02 | -2.653 | -0.351 |
| Rifampicin4 | -1.267 | -0.311 |
| Ethambutol3 | -1.018 | 0.0 |
| Meropenem3 | -0.412 | 0.0 |
| Vancomycin16 | -0.281 | -0.305 |
| Rv2680_day32 | 1.524 | 0.617 |
| H37Rv_KO_MarP | -1.04 | -3.844 |
| hypoxia_3wks | -6.0 | -5.383 |
| hypoxia_6wks | -5.003 | -2.533 |
| glycerol | -0.55 | -0.709 |
| cholesterol | 0.091 | -0.509 |
| AJ | -0.983 | -0.18 |
| Bibs02 | -0.658 | 0.132 |
| Bibs02c | 0.258 | -0.336 |
| BL6 | 1.192 | 2.786 |
| BL6a | 1.65 | 3.965 |
| BXD01 | 1.432 | 4.097 |
| BXD010 | 2.526 | 4.494 |
| BXD011 | 1.606 | 4.043 |
| BXD03 | 1.981 | 2.532 |
| BXD04 | 2.825 | 4.283 |
| BXD05 | 2.21 | 3.297 |
| BXD06 | 2.552 | 4.797 |
| BXD07 | 1.893 | 4.33 |
| BXD08 | 1.546 | 4.103 |
| BXD09 | 2.406 | 4.378 |
| CAST | 1.39 | -0.809 |
| CCcont | 1.214 | 4.389 |
| DS01 | -0.388 | 0.0 |
| DS02 | 0.808 | -0.548 |
| DS04 | 0.083 | 1.97 |
| DS0c | 0.823 | -0.168 |
| GP01 | 1.488 | -0.077 |
| GP02 | 1.192 | 0.116 |
| GP0c | 0.422 | 1.73 |
| NOD | -0.342 | -0.789 |
| NZO | -1.878 | -0.701 |
| PWK | -0.452 | -0.689 |
| H37Rv_KO_CtpC | 0.93 | 1.944 |
| H37Rv_KO_CtpD | -0.071 | 1.545 |
| H37Rv_KO_Rv1272 | 1.838 | 2.512 |
| H37Rv_KO_SugABC | 0.178 | 3.415 |
| H37Rv_KO_MbtN | -0.388 | 5.206 |
| Trans05 | 1.268 | 3.053 |
| macrophage_unactivated | -0.748 | -0.716 |
| IL1 | 0.264 | 0.341 |
| Rapamycin | -1.307 | 0.0 |
| Tcell | 0.248 | -1.619 |
| GMCSF | 1.861 | 0.721 |
| IFNab | 0.257 | 2.283 |
| IFNg | 2.261 | 1.109 |
| IFNg_GMCSF1 | 2.231 | -0.396 |
| Rv1432_day32 | 1.763 | -1.71 |
| Rv1565c_day32 | -0.25 | -3.884 |
| secA2_input | 1.34 | 1.565 |
| delta_Rv3594 | -0.422 | 0.153 |
| delta_Rv3717 | 0.092 | 0.946 |
| delta_Rv3811 | -0.294 | 0.913 |
| delta_Rv0954 | -2.771 | -3.66 |
| PonA1 | -2.17 | -5.488 |
| EccD1_KO | -1.177 | -2.457 |
| EspI_KO | -2.053 | -2.073 |
| PE35_KO | -1.269 | -3.104 |
| PPE68_KO | -2.348 | -3.161 |
| glycerol2 | 0.102 | 0.82 |
| lignocerate | 0.6 | 0.0 |
| oleate | -1.019 | 0.0 |
| phosphatidylcholine | 0.045 | 0.0 |
| acetate | 0.677 | 0.0 |
| glucAc | 0.533 | 0.392 |
| Rv0950ko | -1.342 | -0.214 |
| Rv1096ko | 0.199 | 0.178 |
| Rv3684ko | 0.514 | 0.635 |
| delta_otsA_trehalose | 0.35 | 0.0 |