Top 10 genes with highest correlation to Rv0821c/phoY2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.6764) | info on Rv3210c/- |
| Rv3720/- | (cc=0.5788) | info on Rv3720/- |
| Rv0475/hbhA | (cc=0.5722) | info on Rv0475/hbhA |
| Rv0930/pstA1 | (cc=0.5677) | info on Rv0930/pstA1 |
| Rv3719/- | (cc=0.5669) | info on Rv3719/- |
| Rv1683/- | (cc=0.5506) | info on Rv1683/- |
| Rv3823c/mmpL8 | (cc=0.5437) | info on Rv3823c/mmpL8 |
| Rv0820/phoT | (cc=0.539) | info on Rv0820/phoT |
| Rv0309/- | (cc=0.5344) | info on Rv0309/- |
| Rv2190c/- | (cc=0.5328) | info on Rv2190c/- |
Correlation of Rv0821c/phoY2 with Rv1683/-
Normalized LFCs for Rv0821c/phoY2:
(description and provenance of datasets)
| Rv0821c/phoY2 | Rv1683/- | |
| Fe_supp_jason_reseq | -0.185 | -1.097 |
| low_pH_jason_reseq | 0.641 | 1.116 |
| NO_jason_reseq | -0.937 | 1.89 |
| B6_jason_reseq | 0.493 | 0.26 |
| MHCII_jason_reseq | -0.554 | -0.897 |
| Isoniazid02 | -2.653 | 0.083 |
| Rifampicin4 | -1.267 | -0.872 |
| Ethambutol3 | -1.018 | -0.392 |
| Meropenem3 | -0.412 | -0.568 |
| Vancomycin16 | -0.281 | -1.051 |
| Rv2680_day32 | 1.524 | -1.252 |
| H37Rv_KO_MarP | -1.04 | 0.395 |
| hypoxia_3wks | -6.0 | -1.388 |
| hypoxia_6wks | -5.003 | -0.593 |
| glycerol | -0.55 | 0.544 |
| cholesterol | 0.091 | 0.39 |
| AJ | -0.983 | -0.65 |
| Bibs02 | -0.658 | -0.371 |
| Bibs02c | 0.258 | -0.424 |
| BL6 | 1.192 | 1.713 |
| BL6a | 1.65 | 1.771 |
| BXD01 | 1.432 | 2.314 |
| BXD010 | 2.526 | 1.619 |
| BXD011 | 1.606 | 2.729 |
| BXD03 | 1.981 | 0.849 |
| BXD04 | 2.825 | 0.933 |
| BXD05 | 2.21 | 1.652 |
| BXD06 | 2.552 | 1.954 |
| BXD07 | 1.893 | 2.564 |
| BXD08 | 1.546 | 2.081 |
| BXD09 | 2.406 | 2.057 |
| CAST | 1.39 | -0.646 |
| CCcont | 1.214 | 1.214 |
| DS01 | -0.388 | 0.0 |
| DS02 | 0.808 | -0.61 |
| DS04 | 0.083 | -0.883 |
| DS0c | 0.823 | 0.129 |
| GP01 | 1.488 | 2.033 |
| GP02 | 1.192 | 0.263 |
| GP0c | 0.422 | 2.249 |
| NOD | -0.342 | -0.456 |
| NZO | -1.878 | 0.0 |
| PWK | -0.452 | -0.257 |
| H37Rv_KO_CtpC | 0.93 | 0.847 |
| H37Rv_KO_CtpD | -0.071 | 1.197 |
| H37Rv_KO_Rv1272 | 1.838 | 1.297 |
| H37Rv_KO_SugABC | 0.178 | -0.278 |
| H37Rv_KO_MbtN | -0.388 | 1.095 |
| Trans05 | 1.268 | 3.916 |
| macrophage_unactivated | -0.748 | 0.139 |
| IL1 | 0.264 | 0.383 |
| Rapamycin | -1.307 | -0.436 |
| Tcell | 0.248 | 1.603 |
| GMCSF | 1.861 | -0.375 |
| IFNab | 0.257 | 0.263 |
| IFNg | 2.261 | -0.123 |
| IFNg_GMCSF1 | 2.231 | -0.292 |
| Rv1432_day32 | 1.763 | 0.924 |
| Rv1565c_day32 | -0.25 | 0.509 |
| secA2_input | 1.34 | 0.445 |
| delta_Rv3594 | -0.422 | 0.812 |
| delta_Rv3717 | 0.092 | 3.05 |
| delta_Rv3811 | -0.294 | 0.693 |
| delta_Rv0954 | -2.771 | -1.722 |
| PonA1 | -2.17 | -0.488 |
| EccD1_KO | -1.177 | -1.779 |
| EspI_KO | -2.053 | -1.734 |
| PE35_KO | -1.269 | -0.875 |
| PPE68_KO | -2.348 | -1.328 |
| glycerol2 | 0.102 | 0.705 |
| lignocerate | 0.6 | 0.613 |
| oleate | -1.019 | 0.713 |
| phosphatidylcholine | 0.045 | 0.311 |
| acetate | 0.677 | 1.76 |
| glucAc | 0.533 | 1.596 |
| Rv0950ko | -1.342 | -0.793 |
| Rv1096ko | 0.199 | 0.142 |
| Rv3684ko | 0.514 | 0.154 |
| delta_otsA_trehalose | 0.35 | 0.147 |