Top 10 genes with highest correlation to Rv0806c/cpsY:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2733c/- | (cc=0.7682) | info on Rv2733c/- |
| Rv1473/- | (cc=0.6954) | info on Rv1473/- |
| Rv2467/pepN | (cc=0.6826) | info on Rv2467/pepN |
| Rv0813c/- | (cc=0.6692) | info on Rv0813c/- |
| Rv2344c/dgt | (cc=0.6135) | info on Rv2344c/dgt |
| Rv2966c/- | (cc=0.607) | info on Rv2966c/- |
| Rv2125/- | (cc=0.6035) | info on Rv2125/- |
| Rv1314c/- | (cc=0.5724) | info on Rv1314c/- |
| Rv2140c/TB18.6 | (cc=0.5712) | info on Rv2140c/TB18.6 |
| Rv3557c/- | (cc=0.5655) | info on Rv3557c/- |
Correlation of Rv0806c/cpsY with Rv2966c/-
Normalized LFCs for Rv0806c/cpsY:
(description and provenance of datasets)
| Rv0806c/cpsY | Rv2966c/- | |
| Fe_supp_jason_reseq | -1.05 | 2.671 |
| low_pH_jason_reseq | -2.12 | -0.634 |
| NO_jason_reseq | -0.431 | 0.0 |
| B6_jason_reseq | -2.577 | -0.421 |
| MHCII_jason_reseq | -0.044 | -0.236 |
| Isoniazid02 | -1.614 | 1.011 |
| Rifampicin4 | -1.132 | -0.309 |
| Ethambutol3 | 1.245 | -0.795 |
| Meropenem3 | 0.477 | -3.068 |
| Vancomycin16 | -1.143 | -1.785 |
| Rv2680_day32 | -0.169 | 0.359 |
| H37Rv_KO_MarP | -0.474 | -1.82 |
| hypoxia_3wks | 0.239 | -0.478 |
| hypoxia_6wks | -1.729 | -1.539 |
| glycerol | 1.496 | 2.126 |
| cholesterol | -0.246 | 1.371 |
| AJ | -2.165 | -0.919 |
| Bibs02 | -0.658 | -0.878 |
| Bibs02c | 0.15 | -0.376 |
| BL6 | -2.417 | -0.839 |
| BL6a | -1.263 | -0.112 |
| BXD01 | -3.001 | -0.874 |
| BXD010 | -1.932 | -0.859 |
| BXD011 | -1.214 | -0.505 |
| BXD03 | -2.761 | 0.072 |
| BXD04 | -2.455 | -0.222 |
| BXD05 | -2.286 | -0.533 |
| BXD06 | -1.967 | -0.426 |
| BXD07 | -2.088 | -0.929 |
| BXD08 | -2.006 | -0.892 |
| BXD09 | -2.575 | -0.557 |
| CAST | -4.219 | -0.913 |
| CCcont | 0.037 | 1.63 |
| DS01 | -2.402 | -0.133 |
| DS02 | -3.605 | -1.045 |
| DS04 | -1.772 | 1.296 |
| DS0c | -1.255 | -1.042 |
| GP01 | -0.477 | -0.662 |
| GP02 | -1.699 | -0.558 |
| GP0c | -1.961 | -0.872 |
| NOD | -1.432 | 1.434 |
| NZO | -2.117 | -1.139 |
| PWK | -3.332 | -0.942 |
| H37Rv_KO_CtpC | -0.661 | -0.292 |
| H37Rv_KO_CtpD | -2.206 | 0.068 |
| H37Rv_KO_Rv1272 | -0.121 | -0.559 |
| H37Rv_KO_SugABC | 1.11 | 0.364 |
| H37Rv_KO_MbtN | 0.768 | 2.759 |
| Trans05 | -1.578 | -0.151 |
| macrophage_unactivated | 1.562 | 0.701 |
| IL1 | -0.32 | -0.78 |
| Rapamycin | 0.457 | 0.239 |
| Tcell | 1.45 | 0.0 |
| GMCSF | -0.187 | -0.217 |
| IFNab | -0.327 | 1.255 |
| IFNg | -0.39 | -0.97 |
| IFNg_GMCSF1 | -1.109 | -0.534 |
| Rv1432_day32 | 1.083 | -0.763 |
| Rv1565c_day32 | 0.087 | -0.269 |
| secA2_input | -0.105 | -0.902 |
| delta_Rv3594 | 3.879 | 4.026 |
| delta_Rv3717 | 4.198 | 3.729 |
| delta_Rv3811 | 2.208 | 2.919 |
| delta_Rv0954 | 3.34 | 2.362 |
| PonA1 | 0.0 | 0.56 |
| EccD1_KO | 1.822 | 0.98 |
| EspI_KO | 1.851 | 0.85 |
| PE35_KO | 0.601 | 0.98 |
| PPE68_KO | 1.913 | 1.795 |
| glycerol2 | -1.283 | -2.287 |
| lignocerate | -2.512 | -1.527 |
| oleate | -2.44 | -1.484 |
| phosphatidylcholine | -2.683 | -1.606 |
| acetate | 0.15 | -0.078 |
| glucAc | -0.272 | -0.81 |
| Rv0950ko | -0.051 | 0.256 |
| Rv1096ko | -0.576 | 0.0 |
| Rv3684ko | -0.468 | -1.248 |
| delta_otsA_trehalose | -0.149 | -0.232 |