Top 10 genes with highest correlation to Rv0806c/cpsY:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2733c/- | (cc=0.7682) | info on Rv2733c/- |
| Rv1473/- | (cc=0.6954) | info on Rv1473/- |
| Rv2467/pepN | (cc=0.6826) | info on Rv2467/pepN |
| Rv0813c/- | (cc=0.6692) | info on Rv0813c/- |
| Rv2344c/dgt | (cc=0.6135) | info on Rv2344c/dgt |
| Rv2966c/- | (cc=0.607) | info on Rv2966c/- |
| Rv2125/- | (cc=0.6035) | info on Rv2125/- |
| Rv1314c/- | (cc=0.5724) | info on Rv1314c/- |
| Rv2140c/TB18.6 | (cc=0.5712) | info on Rv2140c/TB18.6 |
| Rv3557c/- | (cc=0.5655) | info on Rv3557c/- |
Correlation of Rv0806c/cpsY with Rv2125/-
Normalized LFCs for Rv0806c/cpsY:
(description and provenance of datasets)
| Rv0806c/cpsY | Rv2125/- | |
| Fe_supp_jason_reseq | -1.05 | 0.845 |
| low_pH_jason_reseq | -2.12 | -0.231 |
| NO_jason_reseq | -0.431 | -0.11 |
| B6_jason_reseq | -2.577 | 0.428 |
| MHCII_jason_reseq | -0.044 | 0.874 |
| Isoniazid02 | -1.614 | 1.013 |
| Rifampicin4 | -1.132 | -0.171 |
| Ethambutol3 | 1.245 | 0.06 |
| Meropenem3 | 0.477 | 0.159 |
| Vancomycin16 | -1.143 | -0.106 |
| Rv2680_day32 | -0.169 | -0.055 |
| H37Rv_KO_MarP | -0.474 | 0.876 |
| hypoxia_3wks | 0.239 | 0.0 |
| hypoxia_6wks | -1.729 | -0.299 |
| glycerol | 1.496 | 1.122 |
| cholesterol | -0.246 | 0.722 |
| AJ | -2.165 | 0.368 |
| Bibs02 | -0.658 | -0.371 |
| Bibs02c | 0.15 | 0.394 |
| BL6 | -2.417 | -1.865 |
| BL6a | -1.263 | -0.342 |
| BXD01 | -3.001 | -1.648 |
| BXD010 | -1.932 | -1.35 |
| BXD011 | -1.214 | -1.534 |
| BXD03 | -2.761 | -1.12 |
| BXD04 | -2.455 | -1.647 |
| BXD05 | -2.286 | -0.946 |
| BXD06 | -1.967 | -1.222 |
| BXD07 | -2.088 | -1.3 |
| BXD08 | -2.006 | -1.139 |
| BXD09 | -2.575 | -1.068 |
| CAST | -4.219 | -0.661 |
| CCcont | 0.037 | -1.205 |
| DS01 | -2.402 | 0.022 |
| DS02 | -3.605 | -0.391 |
| DS04 | -1.772 | 0.475 |
| DS0c | -1.255 | -0.035 |
| GP01 | -0.477 | 0.67 |
| GP02 | -1.699 | 0.046 |
| GP0c | -1.961 | 0.522 |
| NOD | -1.432 | 0.145 |
| NZO | -2.117 | -0.539 |
| PWK | -3.332 | -0.826 |
| H37Rv_KO_CtpC | -0.661 | -1.043 |
| H37Rv_KO_CtpD | -2.206 | -1.512 |
| H37Rv_KO_Rv1272 | -0.121 | -1.109 |
| H37Rv_KO_SugABC | 1.11 | 0.948 |
| H37Rv_KO_MbtN | 0.768 | 0.311 |
| Trans05 | -1.578 | -1.4 |
| macrophage_unactivated | 1.562 | 0.249 |
| IL1 | -0.32 | -0.024 |
| Rapamycin | 0.457 | 0.43 |
| Tcell | 1.45 | -0.971 |
| GMCSF | -0.187 | 0.042 |
| IFNab | -0.327 | 0.239 |
| IFNg | -0.39 | -0.224 |
| IFNg_GMCSF1 | -1.109 | 0.575 |
| Rv1432_day32 | 1.083 | 0.095 |
| Rv1565c_day32 | 0.087 | 0.485 |
| secA2_input | -0.105 | 0.106 |
| delta_Rv3594 | 3.879 | 0.965 |
| delta_Rv3717 | 4.198 | 1.072 |
| delta_Rv3811 | 2.208 | 1.184 |
| delta_Rv0954 | 3.34 | 1.26 |
| PonA1 | 0.0 | 0.965 |
| EccD1_KO | 1.822 | 0.562 |
| EspI_KO | 1.851 | 0.502 |
| PE35_KO | 0.601 | 0.16 |
| PPE68_KO | 1.913 | 0.474 |
| glycerol2 | -1.283 | -1.033 |
| lignocerate | -2.512 | -0.669 |
| oleate | -2.44 | -0.88 |
| phosphatidylcholine | -2.683 | -0.819 |
| acetate | 0.15 | 0.318 |
| glucAc | -0.272 | 0.0 |
| Rv0950ko | -0.051 | -0.151 |
| Rv1096ko | -0.576 | 0.106 |
| Rv3684ko | -0.468 | -0.747 |
| delta_otsA_trehalose | -0.149 | 0.132 |