Top 10 genes with highest correlation to Rv0789c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.6574) | info on Rv1289/- |
| Rv1489A/- | (cc=0.6491) | info on Rv1489A/- |
| Rv2802c/- | (cc=0.6346) | info on Rv2802c/- |
| Rv2532c/- | (cc=0.6322) | info on Rv2532c/- |
| Rv2019/- | (cc=0.6029) | info on Rv2019/- |
| Rv0964c/- | (cc=0.5948) | info on Rv0964c/- |
| Rv3195/- | (cc=0.5915) | info on Rv3195/- |
| Rv2237/- | (cc=0.5911) | info on Rv2237/- |
| Rv1725c/- | (cc=0.5887) | info on Rv1725c/- |
| Rv1038c/esxJ | (cc=0.5839) | info on Rv1038c/esxJ |
Correlation of Rv0789c/- with Rv2532c/-
Normalized LFCs for Rv0789c/-:
(description and provenance of datasets)
| Rv0789c/- | Rv2532c/- | |
| Fe_supp_jason_reseq | -0.073 | 0.077 |
| low_pH_jason_reseq | 0.284 | -0.142 |
| NO_jason_reseq | -1.362 | -0.927 |
| B6_jason_reseq | -0.395 | 0.261 |
| MHCII_jason_reseq | 0.449 | 1.303 |
| Isoniazid02 | -0.073 | 0.432 |
| Rifampicin4 | -0.815 | -1.313 |
| Ethambutol3 | -0.519 | -0.103 |
| Meropenem3 | -0.272 | -0.229 |
| Vancomycin16 | -0.167 | 0.382 |
| Rv2680_day32 | 0.222 | -0.539 |
| H37Rv_KO_MarP | -0.714 | 0.648 |
| hypoxia_3wks | -1.328 | 0.183 |
| hypoxia_6wks | 0.23 | 0.975 |
| glycerol | -0.873 | 0.208 |
| cholesterol | -0.682 | -0.189 |
| AJ | 0.02 | -0.252 |
| Bibs02 | -0.699 | -0.387 |
| Bibs02c | 0.018 | 0.799 |
| BL6 | -1.162 | -1.155 |
| BL6a | -0.405 | 0.281 |
| BXD01 | -0.307 | -1.316 |
| BXD010 | 0.104 | -0.35 |
| BXD011 | -1.379 | -0.82 |
| BXD03 | -0.768 | -1.069 |
| BXD04 | -0.667 | -0.068 |
| BXD05 | -0.707 | -0.717 |
| BXD06 | -1.847 | -1.0 |
| BXD07 | -1.23 | -0.597 |
| BXD08 | -0.68 | -0.882 |
| BXD09 | -0.47 | -0.771 |
| CAST | -0.332 | 0.237 |
| CCcont | -0.383 | -0.654 |
| DS01 | -0.021 | -0.082 |
| DS02 | -0.151 | -0.679 |
| DS04 | 1.314 | 0.093 |
| DS0c | 0.141 | -0.011 |
| GP01 | -0.133 | -1.7 |
| GP02 | -1.1 | -1.314 |
| GP0c | 0.0 | -1.791 |
| NOD | -0.303 | -0.343 |
| NZO | 1.224 | -0.131 |
| PWK | -0.246 | 0.546 |
| H37Rv_KO_CtpC | 0.412 | -0.008 |
| H37Rv_KO_CtpD | -1.97 | -1.919 |
| H37Rv_KO_Rv1272 | 0.069 | -1.683 |
| H37Rv_KO_SugABC | 0.403 | -0.102 |
| H37Rv_KO_MbtN | -1.769 | 0.421 |
| Trans05 | 1.333 | -0.623 |
| macrophage_unactivated | 0.776 | -0.354 |
| IL1 | 2.658 | 0.81 |
| Rapamycin | -0.433 | -0.319 |
| Tcell | 0.71 | -1.196 |
| GMCSF | -1.125 | 1.428 |
| IFNab | 0.744 | 0.59 |
| IFNg | -0.091 | 0.609 |
| IFNg_GMCSF1 | 1.279 | 0.327 |
| Rv1432_day32 | 1.095 | 0.232 |
| Rv1565c_day32 | 0.344 | -0.305 |
| secA2_input | -0.434 | 0.0 |
| delta_Rv3594 | -0.889 | 0.089 |
| delta_Rv3717 | 0.228 | -0.015 |
| delta_Rv3811 | -0.772 | -1.811 |
| delta_Rv0954 | -0.974 | -1.61 |
| PonA1 | -0.791 | 0.91 |
| EccD1_KO | 1.22 | 0.299 |
| EspI_KO | 0.499 | -0.197 |
| PE35_KO | 1.164 | 0.446 |
| PPE68_KO | 0.803 | 0.829 |
| glycerol2 | 3.129 | 1.208 |
| lignocerate | 3.78 | 2.474 |
| oleate | 0.196 | -0.784 |
| phosphatidylcholine | 2.994 | 2.22 |
| acetate | 3.712 | 3.405 |
| glucAc | 3.388 | 2.638 |
| Rv0950ko | 0.223 | -0.588 |
| Rv1096ko | 1.252 | -1.043 |
| Rv3684ko | 0.658 | 0.033 |
| delta_otsA_trehalose | -1.059 | -0.965 |