Top 10 genes with highest correlation to Rv0789c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.6574) | info on Rv1289/- |
| Rv1489A/- | (cc=0.6491) | info on Rv1489A/- |
| Rv2802c/- | (cc=0.6346) | info on Rv2802c/- |
| Rv2532c/- | (cc=0.6322) | info on Rv2532c/- |
| Rv2019/- | (cc=0.6029) | info on Rv2019/- |
| Rv0964c/- | (cc=0.5948) | info on Rv0964c/- |
| Rv3195/- | (cc=0.5915) | info on Rv3195/- |
| Rv2237/- | (cc=0.5911) | info on Rv2237/- |
| Rv1725c/- | (cc=0.5887) | info on Rv1725c/- |
| Rv1038c/esxJ | (cc=0.5839) | info on Rv1038c/esxJ |
Correlation of Rv0789c/- with Rv1725c/-
Normalized LFCs for Rv0789c/-:
(description and provenance of datasets)
| Rv0789c/- | Rv1725c/- | |
| Fe_supp_jason_reseq | -0.073 | -0.071 |
| low_pH_jason_reseq | 0.284 | -0.852 |
| NO_jason_reseq | -1.362 | 0.333 |
| B6_jason_reseq | -0.395 | -0.975 |
| MHCII_jason_reseq | 0.449 | 0.257 |
| Isoniazid02 | -0.073 | 0.205 |
| Rifampicin4 | -0.815 | 0.265 |
| Ethambutol3 | -0.519 | 0.255 |
| Meropenem3 | -0.272 | 0.315 |
| Vancomycin16 | -0.167 | -0.085 |
| Rv2680_day32 | 0.222 | 0.205 |
| H37Rv_KO_MarP | -0.714 | 0.598 |
| hypoxia_3wks | -1.328 | 0.0 |
| hypoxia_6wks | 0.23 | -0.136 |
| glycerol | -0.873 | 0.053 |
| cholesterol | -0.682 | -0.219 |
| AJ | 0.02 | 0.513 |
| Bibs02 | -0.699 | 0.0 |
| Bibs02c | 0.018 | -0.194 |
| BL6 | -1.162 | 0.439 |
| BL6a | -0.405 | -0.277 |
| BXD01 | -0.307 | -0.535 |
| BXD010 | 0.104 | -0.478 |
| BXD011 | -1.379 | -0.33 |
| BXD03 | -0.768 | -0.407 |
| BXD04 | -0.667 | -0.857 |
| BXD05 | -0.707 | -0.532 |
| BXD06 | -1.847 | -0.155 |
| BXD07 | -1.23 | -0.332 |
| BXD08 | -0.68 | 0.1 |
| BXD09 | -0.47 | -0.632 |
| CAST | -0.332 | 0.095 |
| CCcont | -0.383 | -0.114 |
| DS01 | -0.021 | -0.387 |
| DS02 | -0.151 | -1.068 |
| DS04 | 1.314 | 0.284 |
| DS0c | 0.141 | -0.214 |
| GP01 | -0.133 | 0.065 |
| GP02 | -1.1 | 0.381 |
| GP0c | 0.0 | -0.418 |
| NOD | -0.303 | -0.739 |
| NZO | 1.224 | 0.111 |
| PWK | -0.246 | 0.357 |
| H37Rv_KO_CtpC | 0.412 | 0.601 |
| H37Rv_KO_CtpD | -1.97 | -1.686 |
| H37Rv_KO_Rv1272 | 0.069 | 0.895 |
| H37Rv_KO_SugABC | 0.403 | 0.344 |
| H37Rv_KO_MbtN | -1.769 | 0.437 |
| Trans05 | 1.333 | -0.106 |
| macrophage_unactivated | 0.776 | 0.117 |
| IL1 | 2.658 | 0.501 |
| Rapamycin | -0.433 | 0.439 |
| Tcell | 0.71 | -0.485 |
| GMCSF | -1.125 | 0.618 |
| IFNab | 0.744 | 0.057 |
| IFNg | -0.091 | 0.267 |
| IFNg_GMCSF1 | 1.279 | 0.531 |
| Rv1432_day32 | 1.095 | -0.675 |
| Rv1565c_day32 | 0.344 | -0.128 |
| secA2_input | -0.434 | 0.152 |
| delta_Rv3594 | -0.889 | 0.467 |
| delta_Rv3717 | 0.228 | 0.535 |
| delta_Rv3811 | -0.772 | 0.552 |
| delta_Rv0954 | -0.974 | 1.013 |
| PonA1 | -0.791 | -0.111 |
| EccD1_KO | 1.22 | 0.49 |
| EspI_KO | 0.499 | 0.334 |
| PE35_KO | 1.164 | 0.0 |
| PPE68_KO | 0.803 | 0.163 |
| glycerol2 | 3.129 | 1.223 |
| lignocerate | 3.78 | 1.836 |
| oleate | 0.196 | 0.298 |
| phosphatidylcholine | 2.994 | 1.619 |
| acetate | 3.712 | 2.434 |
| glucAc | 3.388 | 2.05 |
| Rv0950ko | 0.223 | -0.235 |
| Rv1096ko | 1.252 | 0.537 |
| Rv3684ko | 0.658 | 0.612 |
| delta_otsA_trehalose | -1.059 | -1.109 |