Top 10 genes with highest correlation to Rv0789c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.6574) | info on Rv1289/- |
| Rv1489A/- | (cc=0.6491) | info on Rv1489A/- |
| Rv2802c/- | (cc=0.6346) | info on Rv2802c/- |
| Rv2532c/- | (cc=0.6322) | info on Rv2532c/- |
| Rv2019/- | (cc=0.6029) | info on Rv2019/- |
| Rv0964c/- | (cc=0.5948) | info on Rv0964c/- |
| Rv3195/- | (cc=0.5915) | info on Rv3195/- |
| Rv2237/- | (cc=0.5911) | info on Rv2237/- |
| Rv1725c/- | (cc=0.5887) | info on Rv1725c/- |
| Rv1038c/esxJ | (cc=0.5839) | info on Rv1038c/esxJ |
Correlation of Rv0789c/- with Rv1489A/-
Normalized LFCs for Rv0789c/-:
(description and provenance of datasets)
| Rv0789c/- | Rv1489A/- | |
| Fe_supp_jason_reseq | -0.073 | -0.111 |
| low_pH_jason_reseq | 0.284 | -1.375 |
| NO_jason_reseq | -1.362 | -0.942 |
| B6_jason_reseq | -0.395 | -0.513 |
| MHCII_jason_reseq | 0.449 | -0.636 |
| Isoniazid02 | -0.073 | -4.051 |
| Rifampicin4 | -0.815 | 0.699 |
| Ethambutol3 | -0.519 | -3.827 |
| Meropenem3 | -0.272 | -3.157 |
| Vancomycin16 | -0.167 | -1.157 |
| Rv2680_day32 | 0.222 | 0.305 |
| H37Rv_KO_MarP | -0.714 | 0.36 |
| hypoxia_3wks | -1.328 | -1.001 |
| hypoxia_6wks | 0.23 | 0.251 |
| glycerol | -0.873 | -1.463 |
| cholesterol | -0.682 | -0.259 |
| AJ | 0.02 | -0.84 |
| Bibs02 | -0.699 | -1.856 |
| Bibs02c | 0.018 | 1.085 |
| BL6 | -1.162 | -0.816 |
| BL6a | -0.405 | -0.336 |
| BXD01 | -0.307 | -0.925 |
| BXD010 | 0.104 | -1.227 |
| BXD011 | -1.379 | -0.285 |
| BXD03 | -0.768 | -2.615 |
| BXD04 | -0.667 | 1.619 |
| BXD05 | -0.707 | -0.301 |
| BXD06 | -1.847 | 0.212 |
| BXD07 | -1.23 | -0.791 |
| BXD08 | -0.68 | 0.096 |
| BXD09 | -0.47 | -0.539 |
| CAST | -0.332 | -0.474 |
| CCcont | -0.383 | 0.118 |
| DS01 | -0.021 | 0.07 |
| DS02 | -0.151 | 0.429 |
| DS04 | 1.314 | -0.453 |
| DS0c | 0.141 | -0.506 |
| GP01 | -0.133 | 0.457 |
| GP02 | -1.1 | 0.998 |
| GP0c | 0.0 | 0.75 |
| NOD | -0.303 | -1.09 |
| NZO | 1.224 | 0.558 |
| PWK | -0.246 | 0.099 |
| H37Rv_KO_CtpC | 0.412 | -0.521 |
| H37Rv_KO_CtpD | -1.97 | -2.391 |
| H37Rv_KO_Rv1272 | 0.069 | 1.724 |
| H37Rv_KO_SugABC | 0.403 | 1.028 |
| H37Rv_KO_MbtN | -1.769 | -1.946 |
| Trans05 | 1.333 | 1.22 |
| macrophage_unactivated | 0.776 | -1.061 |
| IL1 | 2.658 | 0.472 |
| Rapamycin | -0.433 | -0.485 |
| Tcell | 0.71 | -0.723 |
| GMCSF | -1.125 | 0.0 |
| IFNab | 0.744 | -1.088 |
| IFNg | -0.091 | -1.903 |
| IFNg_GMCSF1 | 1.279 | 0.339 |
| Rv1432_day32 | 1.095 | 1.313 |
| Rv1565c_day32 | 0.344 | -0.509 |
| secA2_input | -0.434 | 1.069 |
| delta_Rv3594 | -0.889 | -0.737 |
| delta_Rv3717 | 0.228 | -0.781 |
| delta_Rv3811 | -0.772 | -1.05 |
| delta_Rv0954 | -0.974 | -2.142 |
| PonA1 | -0.791 | -0.815 |
| EccD1_KO | 1.22 | 1.151 |
| EspI_KO | 0.499 | 0.328 |
| PE35_KO | 1.164 | -0.271 |
| PPE68_KO | 0.803 | 0.0 |
| glycerol2 | 3.129 | 2.945 |
| lignocerate | 3.78 | 3.993 |
| oleate | 0.196 | -0.713 |
| phosphatidylcholine | 2.994 | 3.322 |
| acetate | 3.712 | 5.361 |
| glucAc | 3.388 | 4.14 |
| Rv0950ko | 0.223 | -0.416 |
| Rv1096ko | 1.252 | -0.85 |
| Rv3684ko | 0.658 | -0.612 |
| delta_otsA_trehalose | -1.059 | -0.694 |