Top 10 genes with highest correlation to Rv0789c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.6574) | info on Rv1289/- |
| Rv1489A/- | (cc=0.6491) | info on Rv1489A/- |
| Rv2802c/- | (cc=0.6346) | info on Rv2802c/- |
| Rv2532c/- | (cc=0.6322) | info on Rv2532c/- |
| Rv2019/- | (cc=0.6029) | info on Rv2019/- |
| Rv0964c/- | (cc=0.5948) | info on Rv0964c/- |
| Rv3195/- | (cc=0.5915) | info on Rv3195/- |
| Rv2237/- | (cc=0.5911) | info on Rv2237/- |
| Rv1725c/- | (cc=0.5887) | info on Rv1725c/- |
| Rv1038c/esxJ | (cc=0.5839) | info on Rv1038c/esxJ |
Correlation of Rv0789c/- with Rv1289/-
Normalized LFCs for Rv0789c/-:
(description and provenance of datasets)
| Rv0789c/- | Rv1289/- | |
| Fe_supp_jason_reseq | -0.073 | 0.666 |
| low_pH_jason_reseq | 0.284 | -0.099 |
| NO_jason_reseq | -1.362 | 0.659 |
| B6_jason_reseq | -0.395 | 1.077 |
| MHCII_jason_reseq | 0.449 | 0.6 |
| Isoniazid02 | -0.073 | 1.077 |
| Rifampicin4 | -0.815 | 0.162 |
| Ethambutol3 | -0.519 | 0.073 |
| Meropenem3 | -0.272 | 0.299 |
| Vancomycin16 | -0.167 | 0.334 |
| Rv2680_day32 | 0.222 | -1.138 |
| H37Rv_KO_MarP | -0.714 | -0.277 |
| hypoxia_3wks | -1.328 | -1.013 |
| hypoxia_6wks | 0.23 | 0.0 |
| glycerol | -0.873 | -0.54 |
| cholesterol | -0.682 | 0.208 |
| AJ | 0.02 | 0.024 |
| Bibs02 | -0.699 | -0.538 |
| Bibs02c | 0.018 | 0.547 |
| BL6 | -1.162 | -1.07 |
| BL6a | -0.405 | -0.608 |
| BXD01 | -0.307 | -0.634 |
| BXD010 | 0.104 | 0.395 |
| BXD011 | -1.379 | -0.707 |
| BXD03 | -0.768 | -0.847 |
| BXD04 | -0.667 | -1.276 |
| BXD05 | -0.707 | 0.24 |
| BXD06 | -1.847 | -0.374 |
| BXD07 | -1.23 | -0.652 |
| BXD08 | -0.68 | -1.233 |
| BXD09 | -0.47 | -0.962 |
| CAST | -0.332 | 1.485 |
| CCcont | -0.383 | -0.213 |
| DS01 | -0.021 | 0.441 |
| DS02 | -0.151 | 0.551 |
| DS04 | 1.314 | 1.06 |
| DS0c | 0.141 | 0.46 |
| GP01 | -0.133 | 0.242 |
| GP02 | -1.1 | -0.858 |
| GP0c | 0.0 | -0.551 |
| NOD | -0.303 | 1.041 |
| NZO | 1.224 | -0.192 |
| PWK | -0.246 | -0.02 |
| H37Rv_KO_CtpC | 0.412 | 1.16 |
| H37Rv_KO_CtpD | -1.97 | 0.911 |
| H37Rv_KO_Rv1272 | 0.069 | 0.718 |
| H37Rv_KO_SugABC | 0.403 | 0.547 |
| H37Rv_KO_MbtN | -1.769 | -0.184 |
| Trans05 | 1.333 | 0.857 |
| macrophage_unactivated | 0.776 | 0.335 |
| IL1 | 2.658 | 1.05 |
| Rapamycin | -0.433 | 0.055 |
| Tcell | 0.71 | -0.775 |
| GMCSF | -1.125 | 0.095 |
| IFNab | 0.744 | 0.85 |
| IFNg | -0.091 | 0.048 |
| IFNg_GMCSF1 | 1.279 | 0.738 |
| Rv1432_day32 | 1.095 | 0.129 |
| Rv1565c_day32 | 0.344 | 0.0 |
| secA2_input | -0.434 | -0.625 |
| delta_Rv3594 | -0.889 | -0.148 |
| delta_Rv3717 | 0.228 | -0.209 |
| delta_Rv3811 | -0.772 | -0.318 |
| delta_Rv0954 | -0.974 | -0.423 |
| PonA1 | -0.791 | -0.57 |
| EccD1_KO | 1.22 | 2.453 |
| EspI_KO | 0.499 | 1.118 |
| PE35_KO | 1.164 | 1.313 |
| PPE68_KO | 0.803 | 1.616 |
| glycerol2 | 3.129 | 1.801 |
| lignocerate | 3.78 | 2.489 |
| oleate | 0.196 | -0.961 |
| phosphatidylcholine | 2.994 | 2.531 |
| acetate | 3.712 | 2.534 |
| glucAc | 3.388 | 2.382 |
| Rv0950ko | 0.223 | -0.597 |
| Rv1096ko | 1.252 | -1.288 |
| Rv3684ko | 0.658 | -0.511 |
| delta_otsA_trehalose | -1.059 | -0.672 |