TnSeqCorr

Top 10 genes with highest correlation to Rv0761c/adhB:

update plotcorrelationlink to info on gene
Rv0693/pqqE (cc=0.6177) info on Rv0693/pqqE
Rv3149/nuoE (cc=0.5137) info on Rv3149/nuoE
Rv3499c/mce4A (cc=0.5082) info on Rv3499c/mce4A
Rv3494c/mce4F (cc=0.4906) info on Rv3494c/mce4F
Rv3501c/yrbE4A (cc=0.4793) info on Rv3501c/yrbE4A
Rv3498c/mce4B (cc=0.476) info on Rv3498c/mce4B
Rv3497c/mce4C (cc=0.4758) info on Rv3497c/mce4C
Rv3146/nuoB (cc=0.4756) info on Rv3146/nuoB
Rv1337/- (cc=0.4639) info on Rv1337/-
Rv3156/nuoL (cc=0.4632) info on Rv3156/nuoL

Correlation of Rv0761c/adhB with Rv3499c/mce4A

Normalized LFCs for Rv0761c/adhB:
(description and provenance of datasets)
Rv0761c/adhBRv3499c/mce4A
Fe_supp_jason_reseq

-1.214

-0.054

low_pH_jason_reseq

-1.106

-0.44

NO_jason_reseq

0.525

0.252

B6_jason_reseq

-1.15

-1.731

MHCII_jason_reseq

-1.012

-2.073

Isoniazid02

-2.039

-0.116

Rifampicin4

-0.005

0.382

Ethambutol3

-1.214

-0.288

Meropenem3

0.323

-0.979

Vancomycin16

-1.281

0.101

Rv2680_day32

-0.275

-2.57

H37Rv_KO_MarP

0.095

0.435

hypoxia_3wks

0.75

0.148

hypoxia_6wks

0.731

0.418

glycerol

0.448

-0.295

cholesterol

-3.535

-2.911

AJ

-0.457

-3.047

Bibs02

-1.84

-1.714

Bibs02c

-0.385

-0.552

BL6

-0.021

-0.317

BL6a

0.251

-1.032

BXD01

0.527

-0.713

BXD010

0.049

-0.434

BXD011

0.305

-0.446

BXD03

0.618

-1.14

BXD04

0.947

-0.957

BXD05

0.365

-0.426

BXD06

0.451

-0.924

BXD07

0.393

-0.836

BXD08

0.319

-1.444

BXD09

0.682

-0.952

CAST

-1.286

-1.984

CCcont

0.276

0.171

DS01

-1.459

-2.459

DS02

-0.474

-1.473

DS04

0.053

-1.897

DS0c

-0.644

-1.469

GP01

1.012

-0.764

GP02

-0.671

-1.116

GP0c

0.197

0.239

NOD

0.194

-1.17

NZO

-0.42

-2.212

PWK

-0.102

-1.518

H37Rv_KO_CtpC

-0.703

-0.867

H37Rv_KO_CtpD

-0.495

-0.487

H37Rv_KO_Rv1272

1.06

0.802

H37Rv_KO_SugABC

0.868

0.69

H37Rv_KO_MbtN

0.838

0.596

Trans05

0.296

-0.133

macrophage_unactivated

-1.054

-1.196

IL1

1.492

2.236

Rapamycin

1.415

2.065

Tcell

-0.098

-0.323

GMCSF

-1.597

-1.325

IFNab

-1.143

-1.496

IFNg

-1.31

-0.575

IFNg_GMCSF1

-1.455

-1.596

Rv1432_day32

-1.147

-3.85

Rv1565c_day32

-1.328

-2.132

secA2_input

0.474

-0.557

delta_Rv3594

0.18

0.133

delta_Rv3717

0.497

-0.184

delta_Rv3811

0.309

0.184

delta_Rv0954

-0.587

0.136

PonA1

-0.951

-0.169

EccD1_KO

-0.934

0.845

EspI_KO

-0.396

1.306

PE35_KO

-0.242

0.327

PPE68_KO

0.048

0.71

glycerol2

1.457

-0.614

lignocerate

-0.823

0.259

oleate

1.459

0.637

phosphatidylcholine

1.091

-0.427

acetate

-0.313

-0.484

glucAc

-0.153

-0.501

Rv0950ko

0.558

0.115

Rv1096ko

0.579

0.069

Rv3684ko

0.891

-0.075

delta_otsA_trehalose

-0.596

0.179