TnSeqCorr

Top 10 genes with highest correlation to Rv0761c/adhB:

update plotcorrelationlink to info on gene
Rv0693/pqqE (cc=0.6177) info on Rv0693/pqqE
Rv3149/nuoE (cc=0.5137) info on Rv3149/nuoE
Rv3499c/mce4A (cc=0.5082) info on Rv3499c/mce4A
Rv3494c/mce4F (cc=0.4906) info on Rv3494c/mce4F
Rv3501c/yrbE4A (cc=0.4793) info on Rv3501c/yrbE4A
Rv3498c/mce4B (cc=0.476) info on Rv3498c/mce4B
Rv3497c/mce4C (cc=0.4758) info on Rv3497c/mce4C
Rv3146/nuoB (cc=0.4756) info on Rv3146/nuoB
Rv1337/- (cc=0.4639) info on Rv1337/-
Rv3156/nuoL (cc=0.4632) info on Rv3156/nuoL

Correlation of Rv0761c/adhB with Rv3498c/mce4B

Normalized LFCs for Rv0761c/adhB:
(description and provenance of datasets)
Rv0761c/adhBRv3498c/mce4B
Fe_supp_jason_reseq

-1.214

0.104

low_pH_jason_reseq

-1.106

0.758

NO_jason_reseq

0.525

0.026

B6_jason_reseq

-1.15

-2.414

MHCII_jason_reseq

-1.012

-3.285

Isoniazid02

-2.039

-0.307

Rifampicin4

-0.005

0.33

Ethambutol3

-1.214

0.236

Meropenem3

0.323

-0.93

Vancomycin16

-1.281

0.236

Rv2680_day32

-0.275

-2.748

H37Rv_KO_MarP

0.095

0.864

hypoxia_3wks

0.75

0.518

hypoxia_6wks

0.731

0.34

glycerol

0.448

-0.287

cholesterol

-3.535

-3.124

AJ

-0.457

-4.02

Bibs02

-1.84

-0.621

Bibs02c

-0.385

-2.621

BL6

-0.021

-0.086

BL6a

0.251

-1.158

BXD01

0.527

-0.536

BXD010

0.049

-0.309

BXD011

0.305

-0.307

BXD03

0.618

-1.587

BXD04

0.947

-0.816

BXD05

0.365

-0.27

BXD06

0.451

-0.669

BXD07

0.393

0.525

BXD08

0.319

-0.422

BXD09

0.682

-0.704

CAST

-1.286

-1.867

CCcont

0.276

0.737

DS01

-1.459

-3.896

DS02

-0.474

-2.978

DS04

0.053

-1.873

DS0c

-0.644

-2.545

GP01

1.012

0.694

GP02

-0.671

-0.603

GP0c

0.197

1.206

NOD

0.194

-2.032

NZO

-0.42

-3.546

PWK

-0.102

-3.083

H37Rv_KO_CtpC

-0.703

-1.072

H37Rv_KO_CtpD

-0.495

0.231

H37Rv_KO_Rv1272

1.06

-0.187

H37Rv_KO_SugABC

0.868

1.096

H37Rv_KO_MbtN

0.838

0.144

Trans05

0.296

-0.044

macrophage_unactivated

-1.054

-0.947

IL1

1.492

1.91

Rapamycin

1.415

1.906

Tcell

-0.098

-0.388

GMCSF

-1.597

-1.748

IFNab

-1.143

-2.21

IFNg

-1.31

-0.909

IFNg_GMCSF1

-1.455

-1.361

Rv1432_day32

-1.147

-3.512

Rv1565c_day32

-1.328

-3.77

secA2_input

0.474

0.064

delta_Rv3594

0.18

-0.128

delta_Rv3717

0.497

-0.096

delta_Rv3811

0.309

-0.522

delta_Rv0954

-0.587

-0.654

PonA1

-0.951

-0.735

EccD1_KO

-0.934

0.881

EspI_KO

-0.396

0.707

PE35_KO

-0.242

0.683

PPE68_KO

0.048

1.113

glycerol2

1.457

-0.932

lignocerate

-0.823

0.179

oleate

1.459

1.041

phosphatidylcholine

1.091

-0.563

acetate

-0.313

-0.595

glucAc

-0.153

-0.676

Rv0950ko

0.558

0.157

Rv1096ko

0.579

0.537

Rv3684ko

0.891

0.54

delta_otsA_trehalose

-0.596

0.817