TnSeqCorr

Top 10 genes with highest correlation to Rv0761c/adhB:

update plotcorrelationlink to info on gene
Rv0693/pqqE (cc=0.6177) info on Rv0693/pqqE
Rv3149/nuoE (cc=0.5137) info on Rv3149/nuoE
Rv3499c/mce4A (cc=0.5082) info on Rv3499c/mce4A
Rv3494c/mce4F (cc=0.4906) info on Rv3494c/mce4F
Rv3501c/yrbE4A (cc=0.4793) info on Rv3501c/yrbE4A
Rv3498c/mce4B (cc=0.476) info on Rv3498c/mce4B
Rv3497c/mce4C (cc=0.4758) info on Rv3497c/mce4C
Rv3146/nuoB (cc=0.4756) info on Rv3146/nuoB
Rv1337/- (cc=0.4639) info on Rv1337/-
Rv3156/nuoL (cc=0.4632) info on Rv3156/nuoL

Correlation of Rv0761c/adhB with Rv0693/pqqE

Normalized LFCs for Rv0761c/adhB:
(description and provenance of datasets)
Rv0761c/adhBRv0693/pqqE
Fe_supp_jason_reseq

-1.214

-0.884

low_pH_jason_reseq

-1.106

-0.668

NO_jason_reseq

0.525

-0.27

B6_jason_reseq

-1.15

-0.952

MHCII_jason_reseq

-1.012

-0.809

Isoniazid02

-2.039

0.172

Rifampicin4

-0.005

0.0

Ethambutol3

-1.214

0.925

Meropenem3

0.323

0.728

Vancomycin16

-1.281

0.093

Rv2680_day32

-0.275

-1.501

H37Rv_KO_MarP

0.095

0.306

hypoxia_3wks

0.75

0.163

hypoxia_6wks

0.731

1.178

glycerol

0.448

-0.275

cholesterol

-3.535

-2.261

AJ

-0.457

-0.617

Bibs02

-1.84

-1.003

Bibs02c

-0.385

-0.285

BL6

-0.021

-0.779

BL6a

0.251

0.521

BXD01

0.527

-0.177

BXD010

0.049

0.08

BXD011

0.305

0.436

BXD03

0.618

0.214

BXD04

0.947

-0.511

BXD05

0.365

0.482

BXD06

0.451

0.259

BXD07

0.393

0.34

BXD08

0.319

0.92

BXD09

0.682

0.72

CAST

-1.286

-0.809

CCcont

0.276

0.765

DS01

-1.459

-1.867

DS02

-0.474

-1.355

DS04

0.053

0.197

DS0c

-0.644

-0.349

GP01

1.012

0.736

GP02

-0.671

-0.134

GP0c

0.197

0.942

NOD

0.194

-1.076

NZO

-0.42

-1.403

PWK

-0.102

0.516

H37Rv_KO_CtpC

-0.703

-0.724

H37Rv_KO_CtpD

-0.495

0.2

H37Rv_KO_Rv1272

1.06

0.0

H37Rv_KO_SugABC

0.868

0.21

H37Rv_KO_MbtN

0.838

0.541

Trans05

0.296

1.707

macrophage_unactivated

-1.054

-1.42

IL1

1.492

1.278

Rapamycin

1.415

0.924

Tcell

-0.098

-0.303

GMCSF

-1.597

-0.792

IFNab

-1.143

-0.583

IFNg

-1.31

-0.845

IFNg_GMCSF1

-1.455

-0.424

Rv1432_day32

-1.147

-0.746

Rv1565c_day32

-1.328

0.741

secA2_input

0.474

0.617

delta_Rv3594

0.18

-0.174

delta_Rv3717

0.497

-0.143

delta_Rv3811

0.309

-0.229

delta_Rv0954

-0.587

-0.199

PonA1

-0.951

-0.249

EccD1_KO

-0.934

0.72

EspI_KO

-0.396

0.625

PE35_KO

-0.242

0.184

PPE68_KO

0.048

0.522

glycerol2

1.457

2.306

lignocerate

-0.823

0.281

oleate

1.459

0.8

phosphatidylcholine

1.091

1.356

acetate

-0.313

0.791

glucAc

-0.153

1.188

Rv0950ko

0.558

-0.124

Rv1096ko

0.579

0.935

Rv3684ko

0.891

0.96

delta_otsA_trehalose

-0.596

0.044