Top 10 genes with highest correlation to Rv0753c/mmsA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0901/- | (cc=0.573) | info on Rv0901/- |
| Rv1367c/- | (cc=0.5498) | info on Rv1367c/- |
| Rv1864c/- | (cc=0.5438) | info on Rv1864c/- |
| Rv2559c/- | (cc=0.5375) | info on Rv2559c/- |
| Rv1735c/- | (cc=0.5336) | info on Rv1735c/- |
| Rv0840c/pip | (cc=0.5329) | info on Rv0840c/pip |
| Rv3506/fadD17 | (cc=0.5221) | info on Rv3506/fadD17 |
| Rv3354/- | (cc=0.5207) | info on Rv3354/- |
| Rv1708/- | (cc=0.5204) | info on Rv1708/- |
| Rv2943A/- | (cc=0.5165) | info on Rv2943A/- |
Correlation of Rv0753c/mmsA with Rv3354/-
Normalized LFCs for Rv0753c/mmsA:
(description and provenance of datasets)
| Rv0753c/mmsA | Rv3354/- | |
| Fe_supp_jason_reseq | -0.534 | -1.138 |
| low_pH_jason_reseq | 0.688 | -0.381 |
| NO_jason_reseq | 1.11 | -0.793 |
| B6_jason_reseq | 0.534 | 0.985 |
| MHCII_jason_reseq | 0.119 | 1.019 |
| Isoniazid02 | 0.953 | 1.043 |
| Rifampicin4 | 0.176 | 0.125 |
| Ethambutol3 | 0.86 | 0.398 |
| Meropenem3 | 0.612 | 1.179 |
| Vancomycin16 | 0.297 | 0.162 |
| Rv2680_day32 | -0.244 | 0.659 |
| H37Rv_KO_MarP | -0.789 | 0.422 |
| hypoxia_3wks | 0.303 | -0.347 |
| hypoxia_6wks | 0.196 | -0.595 |
| glycerol | 0.783 | 0.674 |
| cholesterol | 0.361 | 0.892 |
| AJ | -0.837 | -0.171 |
| Bibs02 | 0.571 | -0.029 |
| Bibs02c | 0.32 | 0.596 |
| BL6 | -0.678 | -0.912 |
| BL6a | -0.07 | -0.067 |
| BXD01 | -0.366 | -1.687 |
| BXD010 | -0.109 | -1.434 |
| BXD011 | -0.077 | -2.812 |
| BXD03 | -0.242 | -2.487 |
| BXD04 | 0.0 | -1.729 |
| BXD05 | -0.298 | -1.146 |
| BXD06 | -0.833 | -1.932 |
| BXD07 | -0.432 | -2.262 |
| BXD08 | -0.354 | -1.667 |
| BXD09 | -0.291 | -2.542 |
| CAST | 0.0 | 0.097 |
| CCcont | -0.186 | -1.82 |
| DS01 | 0.838 | -0.077 |
| DS02 | 1.347 | 0.269 |
| DS04 | 0.874 | 0.395 |
| DS0c | 1.028 | -0.597 |
| GP01 | 0.68 | -1.486 |
| GP02 | 0.855 | -0.295 |
| GP0c | -0.513 | -0.754 |
| NOD | -0.563 | -0.169 |
| NZO | -1.287 | 0.127 |
| PWK | -0.435 | 0.367 |
| H37Rv_KO_CtpC | -0.291 | -0.788 |
| H37Rv_KO_CtpD | 0.395 | -1.146 |
| H37Rv_KO_Rv1272 | 0.157 | -0.927 |
| H37Rv_KO_SugABC | -0.191 | -0.855 |
| H37Rv_KO_MbtN | -0.088 | -1.624 |
| Trans05 | 0.589 | -0.244 |
| macrophage_unactivated | -0.155 | -1.654 |
| IL1 | -0.676 | -1.649 |
| Rapamycin | -1.0 | -1.034 |
| Tcell | -0.805 | -1.473 |
| GMCSF | -0.552 | -2.118 |
| IFNab | -0.632 | -2.056 |
| IFNg | -0.764 | -0.949 |
| IFNg_GMCSF1 | -0.05 | -0.641 |
| Rv1432_day32 | 0.227 | 0.3 |
| Rv1565c_day32 | 0.317 | 0.635 |
| secA2_input | 1.179 | 0.645 |
| delta_Rv3594 | 0.018 | -0.395 |
| delta_Rv3717 | -0.193 | -0.21 |
| delta_Rv3811 | -0.852 | 0.592 |
| delta_Rv0954 | -0.216 | 0.58 |
| PonA1 | 0.042 | -0.802 |
| EccD1_KO | 1.233 | 1.217 |
| EspI_KO | 0.964 | 1.201 |
| PE35_KO | 0.799 | 0.204 |
| PPE68_KO | 1.161 | 1.254 |
| glycerol2 | -0.031 | 1.595 |
| lignocerate | 1.122 | 1.672 |
| oleate | 0.91 | 0.822 |
| phosphatidylcholine | 0.819 | 1.291 |
| acetate | 0.431 | 1.047 |
| glucAc | 0.305 | 1.449 |
| Rv0950ko | -0.22 | 0.365 |
| Rv1096ko | 1.544 | 0.268 |
| Rv3684ko | 1.772 | 0.933 |
| delta_otsA_trehalose | 1.54 | 0.808 |