Top 10 genes with highest correlation to Rv0731c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1961/- | (cc=0.4837) | info on Rv1961/- |
| Rv2918c/glnD | (cc=0.4799) | info on Rv2918c/glnD |
| Rv1413/- | (cc=0.4713) | info on Rv1413/- |
| Rv0516c/- | (cc=0.4611) | info on Rv0516c/- |
| Rv1245c/- | (cc=0.4479) | info on Rv1245c/- |
| Rv1584c/- | (cc=0.4378) | info on Rv1584c/- |
| Rv2037c/- | (cc=0.4333) | info on Rv2037c/- |
| Rv1749c/- | (cc=0.4319) | info on Rv1749c/- |
| Rv3297/nei | (cc=0.4312) | info on Rv3297/nei |
| Rv3312A/- | (cc=0.4256) | info on Rv3312A/- |
Correlation of Rv0731c/- with Rv1413/-
Normalized LFCs for Rv0731c/-:
(description and provenance of datasets)
| Rv0731c/- | Rv1413/- | |
| Fe_supp_jason_reseq | -1.484 | -0.5 |
| low_pH_jason_reseq | -0.975 | -1.4 |
| NO_jason_reseq | 0.74 | 0.58 |
| B6_jason_reseq | -0.431 | -0.617 |
| MHCII_jason_reseq | -0.892 | -0.25 |
| Isoniazid02 | 0.525 | -0.444 |
| Rifampicin4 | -0.317 | -0.143 |
| Ethambutol3 | -0.98 | -1.063 |
| Meropenem3 | -0.316 | -1.623 |
| Vancomycin16 | -0.029 | -0.825 |
| Rv2680_day32 | -1.232 | -1.976 |
| H37Rv_KO_MarP | 0.22 | -0.11 |
| hypoxia_3wks | -0.371 | 0.255 |
| hypoxia_6wks | 0.405 | 0.142 |
| glycerol | 0.6 | 0.322 |
| cholesterol | 0.823 | 0.44 |
| AJ | 0.203 | 0.176 |
| Bibs02 | -0.634 | -0.14 |
| Bibs02c | 0.099 | -0.955 |
| BL6 | -0.235 | 0.072 |
| BL6a | -0.08 | -0.794 |
| BXD01 | -1.353 | -0.471 |
| BXD010 | -0.525 | -0.324 |
| BXD011 | -0.128 | -0.942 |
| BXD03 | -0.845 | -0.928 |
| BXD04 | -0.662 | -0.134 |
| BXD05 | 0.431 | -0.64 |
| BXD06 | -0.206 | -0.469 |
| BXD07 | -0.266 | -0.307 |
| BXD08 | -0.491 | -0.134 |
| BXD09 | -0.318 | -0.62 |
| CAST | -0.272 | -0.354 |
| CCcont | -0.675 | -0.609 |
| DS01 | 0.956 | 0.291 |
| DS02 | 1.366 | 0.37 |
| DS04 | 1.265 | 0.285 |
| DS0c | 0.644 | 0.119 |
| GP01 | 1.001 | -0.271 |
| GP02 | 2.425 | 1.519 |
| GP0c | 0.578 | -0.712 |
| NOD | 1.269 | -1.487 |
| NZO | -0.272 | -0.341 |
| PWK | -0.189 | -0.24 |
| H37Rv_KO_CtpC | 0.427 | 0.071 |
| H37Rv_KO_CtpD | 0.892 | -0.308 |
| H37Rv_KO_Rv1272 | -0.451 | -1.007 |
| H37Rv_KO_SugABC | 0.587 | 1.282 |
| H37Rv_KO_MbtN | 0.769 | 1.403 |
| Trans05 | 0.327 | -0.359 |
| macrophage_unactivated | -0.158 | -0.6 |
| IL1 | -0.083 | -0.682 |
| Rapamycin | -0.052 | 0.66 |
| Tcell | 0.088 | -0.049 |
| GMCSF | -0.253 | -0.486 |
| IFNab | 0.0 | -0.423 |
| IFNg | -0.759 | 0.243 |
| IFNg_GMCSF1 | 1.656 | -0.405 |
| Rv1432_day32 | -0.481 | -0.927 |
| Rv1565c_day32 | -3.304 | -1.99 |
| secA2_input | 0.191 | -0.019 |
| delta_Rv3594 | 0.15 | 0.288 |
| delta_Rv3717 | 0.898 | 0.057 |
| delta_Rv3811 | 0.0 | -0.51 |
| delta_Rv0954 | -0.221 | 0.063 |
| PonA1 | 0.585 | -0.137 |
| EccD1_KO | -0.806 | -0.25 |
| EspI_KO | -0.405 | -0.476 |
| PE35_KO | -0.044 | -0.473 |
| PPE68_KO | 0.368 | -0.23 |
| glycerol2 | 0.251 | 0.265 |
| lignocerate | 0.423 | 0.625 |
| oleate | 0.0 | -0.267 |
| phosphatidylcholine | 0.053 | 0.143 |
| acetate | 0.698 | -0.12 |
| glucAc | 0.114 | 0.182 |
| Rv0950ko | -0.356 | 0.28 |
| Rv1096ko | 0.736 | -0.763 |
| Rv3684ko | -0.02 | 0.082 |
| delta_otsA_trehalose | 0.287 | 3.435 |