Top 10 genes with highest correlation to Rv0698/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0945/- | (cc=0.5902) | info on Rv0945/- |
| Rv2276/cyp121 | (cc=0.5722) | info on Rv2276/cyp121 |
| Rv0055/rpsR1 | (cc=0.5677) | info on Rv0055/rpsR1 |
| Rv3127/- | (cc=0.5544) | info on Rv3127/- |
| Rv0042c/- | (cc=0.5519) | info on Rv0042c/- |
| Rv3819/- | (cc=0.5221) | info on Rv3819/- |
| Rv0596c/vapB4 | (cc=0.515) | info on Rv0596c/vapB4 |
| Rv1471/trxB1 | (cc=0.5043) | info on Rv1471/trxB1 |
| Rv3213c/- | (cc=0.5036) | info on Rv3213c/- |
| Rv2038c/- | (cc=0.5007) | info on Rv2038c/- |
Correlation of Rv0698/- with Rv0945/-
Normalized LFCs for Rv0698/-:
(description and provenance of datasets)
| Rv0698/- | Rv0945/- | |
| Fe_supp_jason_reseq | -2.327 | -1.432 |
| low_pH_jason_reseq | 0.706 | 0.216 |
| NO_jason_reseq | -0.155 | -1.769 |
| B6_jason_reseq | -2.577 | -2.038 |
| MHCII_jason_reseq | -1.035 | -0.851 |
| Isoniazid02 | -0.113 | -0.141 |
| Rifampicin4 | 0.39 | -0.449 |
| Ethambutol3 | 0.336 | -0.479 |
| Meropenem3 | 0.089 | -0.285 |
| Vancomycin16 | 0.0 | 0.318 |
| Rv2680_day32 | 1.157 | 0.896 |
| H37Rv_KO_MarP | 0.313 | 0.265 |
| hypoxia_3wks | -0.921 | -2.333 |
| hypoxia_6wks | -1.059 | -1.979 |
| glycerol | 0.192 | 2.127 |
| cholesterol | 0.203 | -0.647 |
| AJ | -0.118 | -0.881 |
| Bibs02 | -0.775 | -1.592 |
| Bibs02c | -1.622 | -1.085 |
| BL6 | 1.536 | 0.723 |
| BL6a | -0.207 | -0.626 |
| BXD01 | 0.911 | 1.029 |
| BXD010 | 0.432 | -0.486 |
| BXD011 | 0.233 | -0.569 |
| BXD03 | -0.069 | -0.92 |
| BXD04 | 2.14 | 0.426 |
| BXD05 | 0.835 | -0.602 |
| BXD06 | 0.451 | 0.059 |
| BXD07 | 1.134 | -0.064 |
| BXD08 | 0.541 | 1.986 |
| BXD09 | -0.071 | -0.36 |
| CAST | -0.37 | -1.373 |
| CCcont | 2.126 | 2.31 |
| DS01 | 0.527 | 0.205 |
| DS02 | 0.654 | 0.364 |
| DS04 | 0.354 | -0.613 |
| DS0c | 0.809 | -1.672 |
| GP01 | 0.715 | 1.651 |
| GP02 | -0.292 | -0.213 |
| GP0c | 1.916 | 0.718 |
| NOD | 1.57 | -1.339 |
| NZO | -0.321 | -1.357 |
| PWK | 0.274 | -1.169 |
| H37Rv_KO_CtpC | -0.261 | 2.408 |
| H37Rv_KO_CtpD | 0.949 | -0.976 |
| H37Rv_KO_Rv1272 | 0.315 | 0.778 |
| H37Rv_KO_SugABC | -0.669 | -0.376 |
| H37Rv_KO_MbtN | 0.098 | -0.614 |
| Trans05 | 1.877 | 0.611 |
| macrophage_unactivated | 0.133 | 2.326 |
| IL1 | -0.128 | -0.78 |
| Rapamycin | -0.132 | -0.807 |
| Tcell | 0.521 | 2.63 |
| GMCSF | -1.172 | -0.694 |
| IFNab | 0.248 | 0.0 |
| IFNg | -0.355 | -0.703 |
| IFNg_GMCSF1 | -0.135 | 1.012 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.45 | 0.0 |
| secA2_input | -2.719 | -0.247 |
| delta_Rv3594 | -0.922 | 0.369 |
| delta_Rv3717 | -2.231 | -0.174 |
| delta_Rv3811 | -0.107 | 0.805 |
| delta_Rv0954 | -0.142 | 1.455 |
| PonA1 | -1.196 | 0.212 |
| EccD1_KO | -2.144 | 0.25 |
| EspI_KO | -0.827 | 1.777 |
| PE35_KO | -0.128 | 0.0 |
| PPE68_KO | -0.141 | 0.586 |
| glycerol2 | 2.221 | 3.113 |
| lignocerate | 2.498 | 3.78 |
| oleate | -0.688 | -0.829 |
| phosphatidylcholine | 2.359 | 2.899 |
| acetate | 3.41 | 4.666 |
| glucAc | 2.902 | 3.978 |
| Rv0950ko | -0.256 | -0.09 |
| Rv1096ko | -0.528 | 0.0 |
| Rv3684ko | -0.888 | -0.96 |
| delta_otsA_trehalose | 1.38 | 0.0 |