Top 10 genes with highest correlation to Rv0693/pqqE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0761c/adhB | (cc=0.6177) | info on Rv0761c/adhB |
| Rv3492c/- | (cc=0.6086) | info on Rv3492c/- |
| Rv3501c/yrbE4A | (cc=0.5976) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.5904) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.5829) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.5784) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.5631) | info on Rv3498c/mce4B |
| Rv3526/kshA | (cc=0.5624) | info on Rv3526/kshA |
| Rv3499c/mce4A | (cc=0.5498) | info on Rv3499c/mce4A |
| Rv2147c/- | (cc=0.5255) | info on Rv2147c/- |
Correlation of Rv0693/pqqE with Rv3501c/yrbE4A
Normalized LFCs for Rv0693/pqqE:
(description and provenance of datasets)
| Rv0693/pqqE | Rv3501c/yrbE4A | |
| Fe_supp_jason_reseq | -0.884 | 1.012 |
| low_pH_jason_reseq | -0.668 | -0.326 |
| NO_jason_reseq | -0.27 | 0.58 |
| B6_jason_reseq | -0.952 | -1.279 |
| MHCII_jason_reseq | -0.809 | -2.391 |
| Isoniazid02 | 0.172 | 0.595 |
| Rifampicin4 | 0.0 | 0.628 |
| Ethambutol3 | 0.925 | 1.582 |
| Meropenem3 | 0.728 | 0.162 |
| Vancomycin16 | 0.093 | 0.806 |
| Rv2680_day32 | -1.501 | -2.546 |
| H37Rv_KO_MarP | 0.306 | 0.593 |
| hypoxia_3wks | 0.163 | 0.02 |
| hypoxia_6wks | 1.178 | 0.01 |
| glycerol | -0.275 | -0.724 |
| cholesterol | -2.261 | -3.897 |
| AJ | -0.617 | -3.578 |
| Bibs02 | -1.003 | -0.253 |
| Bibs02c | -0.285 | -1.17 |
| BL6 | -0.779 | 0.509 |
| BL6a | 0.521 | -0.839 |
| BXD01 | -0.177 | -0.422 |
| BXD010 | 0.08 | -0.514 |
| BXD011 | 0.436 | -0.475 |
| BXD03 | 0.214 | -0.332 |
| BXD04 | -0.511 | -0.478 |
| BXD05 | 0.482 | -0.148 |
| BXD06 | 0.259 | -0.545 |
| BXD07 | 0.34 | -0.526 |
| BXD08 | 0.92 | -0.534 |
| BXD09 | 0.72 | -0.544 |
| CAST | -0.809 | -3.056 |
| CCcont | 0.765 | 1.143 |
| DS01 | -1.867 | -1.906 |
| DS02 | -1.355 | -2.002 |
| DS04 | 0.197 | -1.834 |
| DS0c | -0.349 | -2.077 |
| GP01 | 0.736 | 0.999 |
| GP02 | -0.134 | 0.813 |
| GP0c | 0.942 | 0.702 |
| NOD | -1.076 | -1.181 |
| NZO | -1.403 | -2.647 |
| PWK | 0.516 | -2.404 |
| H37Rv_KO_CtpC | -0.724 | -1.477 |
| H37Rv_KO_CtpD | 0.2 | -0.385 |
| H37Rv_KO_Rv1272 | 0.0 | 0.593 |
| H37Rv_KO_SugABC | 0.21 | 0.685 |
| H37Rv_KO_MbtN | 0.541 | 1.06 |
| Trans05 | 1.707 | 0.019 |
| macrophage_unactivated | -1.42 | -1.061 |
| IL1 | 1.278 | 2.035 |
| Rapamycin | 0.924 | 1.847 |
| Tcell | -0.303 | -0.456 |
| GMCSF | -0.792 | -1.677 |
| IFNab | -0.583 | -1.871 |
| IFNg | -0.845 | -0.604 |
| IFNg_GMCSF1 | -0.424 | -0.635 |
| Rv1432_day32 | -0.746 | -2.587 |
| Rv1565c_day32 | 0.741 | -2.279 |
| secA2_input | 0.617 | -0.647 |
| delta_Rv3594 | -0.174 | 0.506 |
| delta_Rv3717 | -0.143 | -0.206 |
| delta_Rv3811 | -0.229 | 0.248 |
| delta_Rv0954 | -0.199 | -0.634 |
| PonA1 | -0.249 | 0.031 |
| EccD1_KO | 0.72 | -0.135 |
| EspI_KO | 0.625 | -0.405 |
| PE35_KO | 0.184 | -0.385 |
| PPE68_KO | 0.522 | -0.058 |
| glycerol2 | 2.306 | 0.118 |
| lignocerate | 0.281 | 1.43 |
| oleate | 0.8 | 0.726 |
| phosphatidylcholine | 1.356 | 0.22 |
| acetate | 0.791 | 0.959 |
| glucAc | 1.188 | 0.671 |
| Rv0950ko | -0.124 | 0.03 |
| Rv1096ko | 0.935 | 0.347 |
| Rv3684ko | 0.96 | 0.989 |
| delta_otsA_trehalose | 0.044 | 0.341 |