Top 10 genes with highest correlation to Rv0693/pqqE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0761c/adhB | (cc=0.6177) | info on Rv0761c/adhB |
| Rv3492c/- | (cc=0.6086) | info on Rv3492c/- |
| Rv3501c/yrbE4A | (cc=0.5976) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.5904) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.5829) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.5784) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.5631) | info on Rv3498c/mce4B |
| Rv3526/kshA | (cc=0.5624) | info on Rv3526/kshA |
| Rv3499c/mce4A | (cc=0.5498) | info on Rv3499c/mce4A |
| Rv2147c/- | (cc=0.5255) | info on Rv2147c/- |
Correlation of Rv0693/pqqE with Rv3499c/mce4A
Normalized LFCs for Rv0693/pqqE:
(description and provenance of datasets)
| Rv0693/pqqE | Rv3499c/mce4A | |
| Fe_supp_jason_reseq | -0.884 | -0.054 |
| low_pH_jason_reseq | -0.668 | -0.44 |
| NO_jason_reseq | -0.27 | 0.252 |
| B6_jason_reseq | -0.952 | -1.731 |
| MHCII_jason_reseq | -0.809 | -2.073 |
| Isoniazid02 | 0.172 | -0.116 |
| Rifampicin4 | 0.0 | 0.382 |
| Ethambutol3 | 0.925 | -0.288 |
| Meropenem3 | 0.728 | -0.979 |
| Vancomycin16 | 0.093 | 0.101 |
| Rv2680_day32 | -1.501 | -2.57 |
| H37Rv_KO_MarP | 0.306 | 0.435 |
| hypoxia_3wks | 0.163 | 0.148 |
| hypoxia_6wks | 1.178 | 0.418 |
| glycerol | -0.275 | -0.295 |
| cholesterol | -2.261 | -2.911 |
| AJ | -0.617 | -3.047 |
| Bibs02 | -1.003 | -1.714 |
| Bibs02c | -0.285 | -0.552 |
| BL6 | -0.779 | -0.317 |
| BL6a | 0.521 | -1.032 |
| BXD01 | -0.177 | -0.713 |
| BXD010 | 0.08 | -0.434 |
| BXD011 | 0.436 | -0.446 |
| BXD03 | 0.214 | -1.14 |
| BXD04 | -0.511 | -0.957 |
| BXD05 | 0.482 | -0.426 |
| BXD06 | 0.259 | -0.924 |
| BXD07 | 0.34 | -0.836 |
| BXD08 | 0.92 | -1.444 |
| BXD09 | 0.72 | -0.952 |
| CAST | -0.809 | -1.984 |
| CCcont | 0.765 | 0.171 |
| DS01 | -1.867 | -2.459 |
| DS02 | -1.355 | -1.473 |
| DS04 | 0.197 | -1.897 |
| DS0c | -0.349 | -1.469 |
| GP01 | 0.736 | -0.764 |
| GP02 | -0.134 | -1.116 |
| GP0c | 0.942 | 0.239 |
| NOD | -1.076 | -1.17 |
| NZO | -1.403 | -2.212 |
| PWK | 0.516 | -1.518 |
| H37Rv_KO_CtpC | -0.724 | -0.867 |
| H37Rv_KO_CtpD | 0.2 | -0.487 |
| H37Rv_KO_Rv1272 | 0.0 | 0.802 |
| H37Rv_KO_SugABC | 0.21 | 0.69 |
| H37Rv_KO_MbtN | 0.541 | 0.596 |
| Trans05 | 1.707 | -0.133 |
| macrophage_unactivated | -1.42 | -1.196 |
| IL1 | 1.278 | 2.236 |
| Rapamycin | 0.924 | 2.065 |
| Tcell | -0.303 | -0.323 |
| GMCSF | -0.792 | -1.325 |
| IFNab | -0.583 | -1.496 |
| IFNg | -0.845 | -0.575 |
| IFNg_GMCSF1 | -0.424 | -1.596 |
| Rv1432_day32 | -0.746 | -3.85 |
| Rv1565c_day32 | 0.741 | -2.132 |
| secA2_input | 0.617 | -0.557 |
| delta_Rv3594 | -0.174 | 0.133 |
| delta_Rv3717 | -0.143 | -0.184 |
| delta_Rv3811 | -0.229 | 0.184 |
| delta_Rv0954 | -0.199 | 0.136 |
| PonA1 | -0.249 | -0.169 |
| EccD1_KO | 0.72 | 0.845 |
| EspI_KO | 0.625 | 1.306 |
| PE35_KO | 0.184 | 0.327 |
| PPE68_KO | 0.522 | 0.71 |
| glycerol2 | 2.306 | -0.614 |
| lignocerate | 0.281 | 0.259 |
| oleate | 0.8 | 0.637 |
| phosphatidylcholine | 1.356 | -0.427 |
| acetate | 0.791 | -0.484 |
| glucAc | 1.188 | -0.501 |
| Rv0950ko | -0.124 | 0.115 |
| Rv1096ko | 0.935 | 0.069 |
| Rv3684ko | 0.96 | -0.075 |
| delta_otsA_trehalose | 0.044 | 0.179 |