Top 10 genes with highest correlation to Rv0693/pqqE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0761c/adhB | (cc=0.6177) | info on Rv0761c/adhB |
| Rv3492c/- | (cc=0.6086) | info on Rv3492c/- |
| Rv3501c/yrbE4A | (cc=0.5976) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.5904) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.5829) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.5784) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.5631) | info on Rv3498c/mce4B |
| Rv3526/kshA | (cc=0.5624) | info on Rv3526/kshA |
| Rv3499c/mce4A | (cc=0.5498) | info on Rv3499c/mce4A |
| Rv2147c/- | (cc=0.5255) | info on Rv2147c/- |
Correlation of Rv0693/pqqE with Rv3500c/yrbE4B
Normalized LFCs for Rv0693/pqqE:
(description and provenance of datasets)
| Rv0693/pqqE | Rv3500c/yrbE4B | |
| Fe_supp_jason_reseq | -0.884 | 0.041 |
| low_pH_jason_reseq | -0.668 | -0.982 |
| NO_jason_reseq | -0.27 | 0.562 |
| B6_jason_reseq | -0.952 | -1.459 |
| MHCII_jason_reseq | -0.809 | -2.141 |
| Isoniazid02 | 0.172 | 0.013 |
| Rifampicin4 | 0.0 | -0.038 |
| Ethambutol3 | 0.925 | 0.225 |
| Meropenem3 | 0.728 | -0.568 |
| Vancomycin16 | 0.093 | 0.533 |
| Rv2680_day32 | -1.501 | -2.969 |
| H37Rv_KO_MarP | 0.306 | 0.028 |
| hypoxia_3wks | 0.163 | 0.391 |
| hypoxia_6wks | 1.178 | 0.155 |
| glycerol | -0.275 | -2.465 |
| cholesterol | -2.261 | -4.573 |
| AJ | -0.617 | -3.361 |
| Bibs02 | -1.003 | -0.917 |
| Bibs02c | -0.285 | -1.103 |
| BL6 | -0.779 | -1.464 |
| BL6a | 0.521 | -1.852 |
| BXD01 | -0.177 | -1.302 |
| BXD010 | 0.08 | -0.174 |
| BXD011 | 0.436 | -0.948 |
| BXD03 | 0.214 | -1.828 |
| BXD04 | -0.511 | -1.196 |
| BXD05 | 0.482 | -0.647 |
| BXD06 | 0.259 | -1.092 |
| BXD07 | 0.34 | -1.748 |
| BXD08 | 0.92 | -1.596 |
| BXD09 | 0.72 | -1.394 |
| CAST | -0.809 | -2.544 |
| CCcont | 0.765 | -0.652 |
| DS01 | -1.867 | -3.247 |
| DS02 | -1.355 | -2.382 |
| DS04 | 0.197 | -2.534 |
| DS0c | -0.349 | -1.516 |
| GP01 | 0.736 | -0.082 |
| GP02 | -0.134 | -0.734 |
| GP0c | 0.942 | -0.408 |
| NOD | -1.076 | -2.673 |
| NZO | -1.403 | -2.114 |
| PWK | 0.516 | -2.316 |
| H37Rv_KO_CtpC | -0.724 | -1.028 |
| H37Rv_KO_CtpD | 0.2 | -0.447 |
| H37Rv_KO_Rv1272 | 0.0 | -0.852 |
| H37Rv_KO_SugABC | 0.21 | 0.509 |
| H37Rv_KO_MbtN | 0.541 | 0.869 |
| Trans05 | 1.707 | -0.127 |
| macrophage_unactivated | -1.42 | -0.619 |
| IL1 | 1.278 | 2.213 |
| Rapamycin | 0.924 | 2.059 |
| Tcell | -0.303 | 0.257 |
| GMCSF | -0.792 | -1.964 |
| IFNab | -0.583 | -2.08 |
| IFNg | -0.845 | -0.612 |
| IFNg_GMCSF1 | -0.424 | -1.049 |
| Rv1432_day32 | -0.746 | -2.967 |
| Rv1565c_day32 | 0.741 | -2.853 |
| secA2_input | 0.617 | -0.316 |
| delta_Rv3594 | -0.174 | -0.066 |
| delta_Rv3717 | -0.143 | -0.42 |
| delta_Rv3811 | -0.229 | -0.04 |
| delta_Rv0954 | -0.199 | -0.419 |
| PonA1 | -0.249 | 0.129 |
| EccD1_KO | 0.72 | 0.572 |
| EspI_KO | 0.625 | 0.088 |
| PE35_KO | 0.184 | -0.362 |
| PPE68_KO | 0.522 | -0.195 |
| glycerol2 | 2.306 | -0.412 |
| lignocerate | 0.281 | 0.546 |
| oleate | 0.8 | 1.51 |
| phosphatidylcholine | 1.356 | -0.01 |
| acetate | 0.791 | -0.288 |
| glucAc | 1.188 | 0.103 |
| Rv0950ko | -0.124 | 0.446 |
| Rv1096ko | 0.935 | 0.238 |
| Rv3684ko | 0.96 | 0.563 |
| delta_otsA_trehalose | 0.044 | 0.05 |