Top 10 genes with highest correlation to Rv0690c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5539) | info on Rv2980/- |
| Rv2504c/scoA | (cc=0.5398) | info on Rv2504c/scoA |
| Rv3571/kshB | (cc=0.4989) | info on Rv3571/kshB |
| Rv2359/zur | (cc=0.4857) | info on Rv2359/zur |
| Rv1930c/- | (cc=0.4459) | info on Rv1930c/- |
| Rv3492c/- | (cc=0.4313) | info on Rv3492c/- |
| Rv1456c/- | (cc=0.4253) | info on Rv1456c/- |
| Rv3074/- | (cc=0.4227) | info on Rv3074/- |
| Rv3055/- | (cc=0.4211) | info on Rv3055/- |
| Rv0087/hycE | (cc=0.4174) | info on Rv0087/hycE |
Correlation of Rv0690c/- with Rv2359/zur
Normalized LFCs for Rv0690c/-:
(description and provenance of datasets)
| Rv0690c/- | Rv2359/zur | |
| Fe_supp_jason_reseq | -0.223 | 0.598 |
| low_pH_jason_reseq | -0.663 | 0.0 |
| NO_jason_reseq | -0.234 | 0.0 |
| B6_jason_reseq | -0.28 | 0.0 |
| MHCII_jason_reseq | -2.012 | 0.0 |
| Isoniazid02 | 0.036 | -0.146 |
| Rifampicin4 | -0.39 | -1.21 |
| Ethambutol3 | 1.099 | 1.156 |
| Meropenem3 | 0.338 | 0.217 |
| Vancomycin16 | -0.032 | -1.552 |
| Rv2680_day32 | 0.104 | 0.0 |
| H37Rv_KO_MarP | 0.669 | -0.272 |
| hypoxia_3wks | -0.211 | 0.0 |
| hypoxia_6wks | 0.635 | 0.0 |
| glycerol | 0.214 | -0.385 |
| cholesterol | -0.171 | 0.435 |
| AJ | -0.316 | -0.442 |
| Bibs02 | -0.351 | -0.348 |
| Bibs02c | 0.423 | -0.191 |
| BL6 | -0.205 | -0.238 |
| BL6a | 0.253 | -0.377 |
| BXD01 | -0.395 | -0.248 |
| BXD010 | 0.05 | 0.107 |
| BXD011 | 0.189 | -0.243 |
| BXD03 | -0.124 | -0.258 |
| BXD04 | -0.349 | 0.103 |
| BXD05 | -0.325 | -0.256 |
| BXD06 | 0.0 | -0.254 |
| BXD07 | -0.512 | -0.264 |
| BXD08 | 0.141 | -0.121 |
| BXD09 | -0.312 | -0.268 |
| CAST | -0.152 | 0.0 |
| CCcont | -0.061 | 0.797 |
| DS01 | -0.116 | -0.216 |
| DS02 | -0.46 | -0.414 |
| DS04 | -0.128 | -0.177 |
| DS0c | -0.902 | -0.198 |
| GP01 | -0.2 | -0.188 |
| GP02 | -0.407 | -0.159 |
| GP0c | -0.395 | -0.248 |
| NOD | -0.129 | -0.428 |
| NZO | -0.29 | -0.38 |
| PWK | 0.016 | -0.374 |
| H37Rv_KO_CtpC | 0.076 | -0.309 |
| H37Rv_KO_CtpD | -1.329 | 0.106 |
| H37Rv_KO_Rv1272 | 0.384 | 0.227 |
| H37Rv_KO_SugABC | -1.945 | 0.159 |
| H37Rv_KO_MbtN | 1.325 | 0.0 |
| Trans05 | 0.638 | 0.476 |
| macrophage_unactivated | -0.657 | 0.0 |
| IL1 | 0.638 | 0.0 |
| Rapamycin | 0.089 | 0.0 |
| Tcell | -0.534 | 0.0 |
| GMCSF | 0.319 | 0.0 |
| IFNab | 0.057 | 0.0 |
| IFNg | -0.708 | 0.0 |
| IFNg_GMCSF1 | 0.434 | 0.0 |
| Rv1432_day32 | -0.897 | 0.0 |
| Rv1565c_day32 | 0.27 | 0.766 |
| secA2_input | 1.767 | 0.992 |
| delta_Rv3594 | 0.159 | -0.369 |
| delta_Rv3717 | -0.223 | -0.303 |
| delta_Rv3811 | -0.431 | -0.358 |
| delta_Rv0954 | 0.134 | 2.396 |
| PonA1 | 1.12 | 0.876 |
| EccD1_KO | 1.105 | 1.003 |
| EspI_KO | 1.184 | 1.748 |
| PE35_KO | 1.488 | 2.917 |
| PPE68_KO | 1.533 | 3.59 |
| glycerol2 | 0.046 | 0.0 |
| lignocerate | 0.432 | 0.0 |
| oleate | -0.173 | 0.0 |
| phosphatidylcholine | 0.158 | 0.0 |
| acetate | 0.409 | 0.0 |
| glucAc | 0.497 | 0.0 |
| Rv0950ko | 0.13 | -1.143 |
| Rv1096ko | 0.467 | -0.929 |
| Rv3684ko | -0.694 | -1.739 |
| delta_otsA_trehalose | -0.391 | -0.218 |