Top 10 genes with highest correlation to Rv0673/echA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.523) | info on Rv0631c/recC |
| Rv0633c/- | (cc=0.4624) | info on Rv0633c/- |
| Rv3368c/- | (cc=0.4404) | info on Rv3368c/- |
| Rv0347/- | (cc=0.4281) | info on Rv0347/- |
| Rv0372c/- | (cc=0.4202) | info on Rv0372c/- |
| Rv0039c/- | (cc=0.4136) | info on Rv0039c/- |
| Rv0077c/- | (cc=0.4005) | info on Rv0077c/- |
| Rv0557/mgtA | (cc=0.3822) | info on Rv0557/mgtA |
| Rv3655c/- | (cc=0.3764) | info on Rv3655c/- |
| Rv3573c/fadE34 | (cc=0.3756) | info on Rv3573c/fadE34 |
Correlation of Rv0673/echA4 with Rv3573c/fadE34
Normalized LFCs for Rv0673/echA4:
(description and provenance of datasets)
| Rv0673/echA4 | Rv3573c/fadE34 | |
| Fe_supp_jason_reseq | 0.688 | -0.791 |
| low_pH_jason_reseq | 0.11 | -0.107 |
| NO_jason_reseq | -1.016 | 0.081 |
| B6_jason_reseq | 1.174 | 1.593 |
| MHCII_jason_reseq | -0.378 | -0.063 |
| Isoniazid02 | 0.534 | -0.29 |
| Rifampicin4 | 0.395 | 0.571 |
| Ethambutol3 | 1.288 | -0.13 |
| Meropenem3 | -0.067 | -0.296 |
| Vancomycin16 | 0.363 | 0.109 |
| Rv2680_day32 | -0.771 | -0.048 |
| H37Rv_KO_MarP | 0.11 | 0.371 |
| hypoxia_3wks | -0.403 | 0.251 |
| hypoxia_6wks | -0.115 | 0.0 |
| glycerol | 0.726 | 0.018 |
| cholesterol | -0.129 | -1.848 |
| AJ | 0.351 | 0.02 |
| Bibs02 | 1.8 | -0.56 |
| Bibs02c | -0.69 | 0.565 |
| BL6 | 1.971 | -0.369 |
| BL6a | -0.432 | 0.343 |
| BXD01 | -0.399 | -0.68 |
| BXD010 | -0.616 | -0.725 |
| BXD011 | -0.212 | 0.944 |
| BXD03 | -0.199 | -0.43 |
| BXD04 | -0.961 | -0.834 |
| BXD05 | 0.467 | 0.3 |
| BXD06 | -0.291 | -0.66 |
| BXD07 | -0.424 | -0.558 |
| BXD08 | -0.812 | -0.918 |
| BXD09 | -0.367 | -0.414 |
| CAST | 0.756 | 0.432 |
| CCcont | -0.802 | -1.627 |
| DS01 | -0.323 | -0.566 |
| DS02 | 0.559 | -0.692 |
| DS04 | 1.865 | 0.097 |
| DS0c | -0.234 | -0.616 |
| GP01 | -1.151 | -0.314 |
| GP02 | -0.867 | -1.014 |
| GP0c | 0.118 | -0.383 |
| NOD | -0.221 | 0.695 |
| NZO | 0.552 | 0.655 |
| PWK | -0.085 | -0.647 |
| H37Rv_KO_CtpC | -2.169 | -1.096 |
| H37Rv_KO_CtpD | 0.6 | -0.774 |
| H37Rv_KO_Rv1272 | -0.279 | -1.375 |
| H37Rv_KO_SugABC | -0.155 | 0.491 |
| H37Rv_KO_MbtN | 0.052 | -0.304 |
| Trans05 | -0.559 | 0.217 |
| macrophage_unactivated | 0.24 | -0.877 |
| IL1 | 1.195 | 0.157 |
| Rapamycin | 1.746 | 0.215 |
| Tcell | 1.466 | -1.512 |
| GMCSF | 0.972 | 0.0 |
| IFNab | 0.23 | -0.112 |
| IFNg | 0.355 | -0.249 |
| IFNg_GMCSF1 | 0.506 | 0.434 |
| Rv1432_day32 | -1.1 | -2.309 |
| Rv1565c_day32 | -2.066 | -0.33 |
| secA2_input | 0.327 | 0.194 |
| delta_Rv3594 | -0.211 | -0.606 |
| delta_Rv3717 | -0.042 | -0.232 |
| delta_Rv3811 | -0.352 | -0.202 |
| delta_Rv0954 | -0.102 | -1.016 |
| PonA1 | -1.519 | -0.27 |
| EccD1_KO | -0.352 | 1.312 |
| EspI_KO | 0.097 | 0.288 |
| PE35_KO | -0.204 | 0.405 |
| PPE68_KO | -0.035 | 0.566 |
| glycerol2 | -0.618 | -0.82 |
| lignocerate | -1.106 | -0.677 |
| oleate | -0.227 | -0.027 |
| phosphatidylcholine | -0.494 | -0.52 |
| acetate | 0.032 | -0.7 |
| glucAc | -1.571 | -0.635 |
| Rv0950ko | 1.472 | 0.793 |
| Rv1096ko | 1.472 | 0.905 |
| Rv3684ko | 1.556 | 1.212 |
| delta_otsA_trehalose | 1.543 | 1.428 |