Top 10 genes with highest correlation to Rv0673/echA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.523) | info on Rv0631c/recC |
| Rv0633c/- | (cc=0.4624) | info on Rv0633c/- |
| Rv3368c/- | (cc=0.4404) | info on Rv3368c/- |
| Rv0347/- | (cc=0.4281) | info on Rv0347/- |
| Rv0372c/- | (cc=0.4202) | info on Rv0372c/- |
| Rv0039c/- | (cc=0.4136) | info on Rv0039c/- |
| Rv0077c/- | (cc=0.4005) | info on Rv0077c/- |
| Rv0557/mgtA | (cc=0.3822) | info on Rv0557/mgtA |
| Rv3655c/- | (cc=0.3764) | info on Rv3655c/- |
| Rv3573c/fadE34 | (cc=0.3756) | info on Rv3573c/fadE34 |
Correlation of Rv0673/echA4 with Rv0039c/-
Normalized LFCs for Rv0673/echA4:
(description and provenance of datasets)
| Rv0673/echA4 | Rv0039c/- | |
| Fe_supp_jason_reseq | 0.688 | -1.939 |
| low_pH_jason_reseq | 0.11 | 0.517 |
| NO_jason_reseq | -1.016 | -0.42 |
| B6_jason_reseq | 1.174 | 0.009 |
| MHCII_jason_reseq | -0.378 | -0.134 |
| Isoniazid02 | 0.534 | 0.304 |
| Rifampicin4 | 0.395 | 0.945 |
| Ethambutol3 | 1.288 | 0.698 |
| Meropenem3 | -0.067 | 0.429 |
| Vancomycin16 | 0.363 | 1.504 |
| Rv2680_day32 | -0.771 | -0.802 |
| H37Rv_KO_MarP | 0.11 | -0.597 |
| hypoxia_3wks | -0.403 | -0.502 |
| hypoxia_6wks | -0.115 | 0.0 |
| glycerol | 0.726 | -0.638 |
| cholesterol | -0.129 | -0.018 |
| AJ | 0.351 | -0.331 |
| Bibs02 | 1.8 | 0.264 |
| Bibs02c | -0.69 | -0.097 |
| BL6 | 1.971 | -0.453 |
| BL6a | -0.432 | -0.36 |
| BXD01 | -0.399 | -0.834 |
| BXD010 | -0.616 | -0.384 |
| BXD011 | -0.212 | -1.007 |
| BXD03 | -0.199 | -0.421 |
| BXD04 | -0.961 | -0.243 |
| BXD05 | 0.467 | 0.303 |
| BXD06 | -0.291 | -0.501 |
| BXD07 | -0.424 | 0.077 |
| BXD08 | -0.812 | -0.341 |
| BXD09 | -0.367 | 0.142 |
| CAST | 0.756 | 0.617 |
| CCcont | -0.802 | -0.359 |
| DS01 | -0.323 | 1.545 |
| DS02 | 0.559 | 0.562 |
| DS04 | 1.865 | 1.789 |
| DS0c | -0.234 | 1.369 |
| GP01 | -1.151 | -1.496 |
| GP02 | -0.867 | -2.318 |
| GP0c | 0.118 | -1.132 |
| NOD | -0.221 | -0.576 |
| NZO | 0.552 | 0.54 |
| PWK | -0.085 | 0.422 |
| H37Rv_KO_CtpC | -2.169 | -0.254 |
| H37Rv_KO_CtpD | 0.6 | 0.667 |
| H37Rv_KO_Rv1272 | -0.279 | 0.161 |
| H37Rv_KO_SugABC | -0.155 | 0.705 |
| H37Rv_KO_MbtN | 0.052 | -1.051 |
| Trans05 | -0.559 | -1.203 |
| macrophage_unactivated | 0.24 | -0.451 |
| IL1 | 1.195 | 0.065 |
| Rapamycin | 1.746 | 0.887 |
| Tcell | 1.466 | -0.169 |
| GMCSF | 0.972 | 0.713 |
| IFNab | 0.23 | -0.045 |
| IFNg | 0.355 | 0.107 |
| IFNg_GMCSF1 | 0.506 | 0.377 |
| Rv1432_day32 | -1.1 | -0.164 |
| Rv1565c_day32 | -2.066 | 0.0 |
| secA2_input | 0.327 | -0.052 |
| delta_Rv3594 | -0.211 | -1.103 |
| delta_Rv3717 | -0.042 | 0.43 |
| delta_Rv3811 | -0.352 | 0.296 |
| delta_Rv0954 | -0.102 | 1.337 |
| PonA1 | -1.519 | 0.322 |
| EccD1_KO | -0.352 | 0.553 |
| EspI_KO | 0.097 | 1.081 |
| PE35_KO | -0.204 | -0.554 |
| PPE68_KO | -0.035 | 0.515 |
| glycerol2 | -0.618 | -0.719 |
| lignocerate | -1.106 | -0.096 |
| oleate | -0.227 | -0.357 |
| phosphatidylcholine | -0.494 | -0.896 |
| acetate | 0.032 | -0.746 |
| glucAc | -1.571 | -0.52 |
| Rv0950ko | 1.472 | 0.377 |
| Rv1096ko | 1.472 | 1.294 |
| Rv3684ko | 1.556 | 1.533 |
| delta_otsA_trehalose | 1.543 | 1.756 |