Top 10 genes with highest correlation to Rv0673/echA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.523) | info on Rv0631c/recC |
| Rv0633c/- | (cc=0.4624) | info on Rv0633c/- |
| Rv3368c/- | (cc=0.4404) | info on Rv3368c/- |
| Rv0347/- | (cc=0.4281) | info on Rv0347/- |
| Rv0372c/- | (cc=0.4202) | info on Rv0372c/- |
| Rv0039c/- | (cc=0.4136) | info on Rv0039c/- |
| Rv0077c/- | (cc=0.4005) | info on Rv0077c/- |
| Rv0557/mgtA | (cc=0.3822) | info on Rv0557/mgtA |
| Rv3655c/- | (cc=0.3764) | info on Rv3655c/- |
| Rv3573c/fadE34 | (cc=0.3756) | info on Rv3573c/fadE34 |
Correlation of Rv0673/echA4 with Rv0347/-
Normalized LFCs for Rv0673/echA4:
(description and provenance of datasets)
| Rv0673/echA4 | Rv0347/- | |
| Fe_supp_jason_reseq | 0.688 | -0.63 |
| low_pH_jason_reseq | 0.11 | -1.29 |
| NO_jason_reseq | -1.016 | 0.129 |
| B6_jason_reseq | 1.174 | 1.434 |
| MHCII_jason_reseq | -0.378 | 0.048 |
| Isoniazid02 | 0.534 | 1.582 |
| Rifampicin4 | 0.395 | -0.165 |
| Ethambutol3 | 1.288 | 1.39 |
| Meropenem3 | -0.067 | -0.151 |
| Vancomycin16 | 0.363 | 0.589 |
| Rv2680_day32 | -0.771 | 0.0 |
| H37Rv_KO_MarP | 0.11 | 0.535 |
| hypoxia_3wks | -0.403 | -0.255 |
| hypoxia_6wks | -0.115 | 0.251 |
| glycerol | 0.726 | 1.191 |
| cholesterol | -0.129 | 0.568 |
| AJ | 0.351 | 0.212 |
| Bibs02 | 1.8 | 0.717 |
| Bibs02c | -0.69 | -0.359 |
| BL6 | 1.971 | 1.056 |
| BL6a | -0.432 | -1.036 |
| BXD01 | -0.399 | -0.751 |
| BXD010 | -0.616 | -0.67 |
| BXD011 | -0.212 | 0.0 |
| BXD03 | -0.199 | -1.115 |
| BXD04 | -0.961 | -0.713 |
| BXD05 | 0.467 | -0.776 |
| BXD06 | -0.291 | -0.043 |
| BXD07 | -0.424 | 0.383 |
| BXD08 | -0.812 | -0.696 |
| BXD09 | -0.367 | -0.735 |
| CAST | 0.756 | -0.15 |
| CCcont | -0.802 | -0.372 |
| DS01 | -0.323 | -0.236 |
| DS02 | 0.559 | 1.282 |
| DS04 | 1.865 | -0.062 |
| DS0c | -0.234 | -0.456 |
| GP01 | -1.151 | -0.031 |
| GP02 | -0.867 | -0.527 |
| GP0c | 0.118 | -0.551 |
| NOD | -0.221 | -1.061 |
| NZO | 0.552 | 0.737 |
| PWK | -0.085 | -0.264 |
| H37Rv_KO_CtpC | -2.169 | -1.456 |
| H37Rv_KO_CtpD | 0.6 | -1.454 |
| H37Rv_KO_Rv1272 | -0.279 | -1.759 |
| H37Rv_KO_SugABC | -0.155 | -1.137 |
| H37Rv_KO_MbtN | 0.052 | -1.089 |
| Trans05 | -0.559 | -0.988 |
| macrophage_unactivated | 0.24 | -1.016 |
| IL1 | 1.195 | -0.611 |
| Rapamycin | 1.746 | -0.632 |
| Tcell | 1.466 | -0.16 |
| GMCSF | 0.972 | 0.364 |
| IFNab | 0.23 | 0.142 |
| IFNg | 0.355 | 0.0 |
| IFNg_GMCSF1 | 0.506 | 0.0 |
| Rv1432_day32 | -1.1 | 0.0 |
| Rv1565c_day32 | -2.066 | 1.579 |
| secA2_input | 0.327 | 0.606 |
| delta_Rv3594 | -0.211 | 0.788 |
| delta_Rv3717 | -0.042 | -0.438 |
| delta_Rv3811 | -0.352 | 0.287 |
| delta_Rv0954 | -0.102 | 0.0 |
| PonA1 | -1.519 | 0.323 |
| EccD1_KO | -0.352 | -0.145 |
| EspI_KO | 0.097 | -0.53 |
| PE35_KO | -0.204 | -1.003 |
| PPE68_KO | -0.035 | -1.469 |
| glycerol2 | -0.618 | -0.88 |
| lignocerate | -1.106 | -0.471 |
| oleate | -0.227 | -0.89 |
| phosphatidylcholine | -0.494 | -0.704 |
| acetate | 0.032 | -0.836 |
| glucAc | -1.571 | 0.0 |
| Rv0950ko | 1.472 | 1.848 |
| Rv1096ko | 1.472 | 3.384 |
| Rv3684ko | 1.556 | 3.674 |
| delta_otsA_trehalose | 1.543 | 2.561 |