Top 10 genes with highest correlation to Rv0673/echA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.523) | info on Rv0631c/recC |
| Rv0633c/- | (cc=0.4624) | info on Rv0633c/- |
| Rv3368c/- | (cc=0.4404) | info on Rv3368c/- |
| Rv0347/- | (cc=0.4281) | info on Rv0347/- |
| Rv0372c/- | (cc=0.4202) | info on Rv0372c/- |
| Rv0039c/- | (cc=0.4136) | info on Rv0039c/- |
| Rv0077c/- | (cc=0.4005) | info on Rv0077c/- |
| Rv0557/mgtA | (cc=0.3822) | info on Rv0557/mgtA |
| Rv3655c/- | (cc=0.3764) | info on Rv3655c/- |
| Rv3573c/fadE34 | (cc=0.3756) | info on Rv3573c/fadE34 |
Correlation of Rv0673/echA4 with Rv0631c/recC
Normalized LFCs for Rv0673/echA4:
(description and provenance of datasets)
| Rv0673/echA4 | Rv0631c/recC | |
| Fe_supp_jason_reseq | 0.688 | -0.393 |
| low_pH_jason_reseq | 0.11 | -0.147 |
| NO_jason_reseq | -1.016 | -0.743 |
| B6_jason_reseq | 1.174 | -1.158 |
| MHCII_jason_reseq | -0.378 | -0.688 |
| Isoniazid02 | 0.534 | 0.153 |
| Rifampicin4 | 0.395 | 0.42 |
| Ethambutol3 | 1.288 | 0.586 |
| Meropenem3 | -0.067 | 0.506 |
| Vancomycin16 | 0.363 | 0.475 |
| Rv2680_day32 | -0.771 | -0.086 |
| H37Rv_KO_MarP | 0.11 | 0.186 |
| hypoxia_3wks | -0.403 | -0.702 |
| hypoxia_6wks | -0.115 | 0.238 |
| glycerol | 0.726 | 0.66 |
| cholesterol | -0.129 | -0.079 |
| AJ | 0.351 | 0.37 |
| Bibs02 | 1.8 | 1.066 |
| Bibs02c | -0.69 | 0.684 |
| BL6 | 1.971 | -0.381 |
| BL6a | -0.432 | -0.08 |
| BXD01 | -0.399 | -0.828 |
| BXD010 | -0.616 | -1.21 |
| BXD011 | -0.212 | -0.482 |
| BXD03 | -0.199 | -0.275 |
| BXD04 | -0.961 | -0.54 |
| BXD05 | 0.467 | -0.535 |
| BXD06 | -0.291 | -0.557 |
| BXD07 | -0.424 | -0.985 |
| BXD08 | -0.812 | -0.722 |
| BXD09 | -0.367 | -1.036 |
| CAST | 0.756 | 0.34 |
| CCcont | -0.802 | -0.51 |
| DS01 | -0.323 | 0.606 |
| DS02 | 0.559 | 0.057 |
| DS04 | 1.865 | 1.405 |
| DS0c | -0.234 | -0.148 |
| GP01 | -1.151 | -0.472 |
| GP02 | -0.867 | -1.504 |
| GP0c | 0.118 | -1.145 |
| NOD | -0.221 | 0.029 |
| NZO | 0.552 | 0.295 |
| PWK | -0.085 | 0.222 |
| H37Rv_KO_CtpC | -2.169 | -0.358 |
| H37Rv_KO_CtpD | 0.6 | -0.105 |
| H37Rv_KO_Rv1272 | -0.279 | -0.287 |
| H37Rv_KO_SugABC | -0.155 | 0.135 |
| H37Rv_KO_MbtN | 0.052 | -1.008 |
| Trans05 | -0.559 | -0.895 |
| macrophage_unactivated | 0.24 | 0.761 |
| IL1 | 1.195 | 0.3 |
| Rapamycin | 1.746 | 0.939 |
| Tcell | 1.466 | 0.0 |
| GMCSF | 0.972 | 1.027 |
| IFNab | 0.23 | 0.157 |
| IFNg | 0.355 | -0.142 |
| IFNg_GMCSF1 | 0.506 | 1.222 |
| Rv1432_day32 | -1.1 | -0.209 |
| Rv1565c_day32 | -2.066 | 0.253 |
| secA2_input | 0.327 | 0.348 |
| delta_Rv3594 | -0.211 | 0.453 |
| delta_Rv3717 | -0.042 | 0.112 |
| delta_Rv3811 | -0.352 | 0.349 |
| delta_Rv0954 | -0.102 | 0.023 |
| PonA1 | -1.519 | -0.864 |
| EccD1_KO | -0.352 | 0.053 |
| EspI_KO | 0.097 | 0.519 |
| PE35_KO | -0.204 | -0.295 |
| PPE68_KO | -0.035 | -0.266 |
| glycerol2 | -0.618 | -1.609 |
| lignocerate | -1.106 | -0.941 |
| oleate | -0.227 | -1.012 |
| phosphatidylcholine | -0.494 | -0.959 |
| acetate | 0.032 | -1.092 |
| glucAc | -1.571 | -0.768 |
| Rv0950ko | 1.472 | 0.259 |
| Rv1096ko | 1.472 | 1.785 |
| Rv3684ko | 1.556 | 1.038 |
| delta_otsA_trehalose | 1.543 | -0.107 |