TnSeqCorr

Top 10 genes with highest correlation to Rv0659c/mazF2:

update plotcorrelationlink to info on gene
Rv1702c/- (cc=0.4413) info on Rv1702c/-
Rv2630/- (cc=0.4299) info on Rv2630/-
Rv0902c/prrB (cc=0.4259) info on Rv0902c/prrB
Rv3111/moaC1 (cc=0.4224) info on Rv3111/moaC1
Rv2221c/glnE (cc=0.4168) info on Rv2221c/glnE
Rv2128/- (cc=0.4038) info on Rv2128/-
Rv3066/- (cc=0.4014) info on Rv3066/-
Rv3208/- (cc=0.3855) info on Rv3208/-
Rv2874/dipZ (cc=0.3815) info on Rv2874/dipZ
Rv0489/gpm1 (cc=0.3754) info on Rv0489/gpm1

Correlation of Rv0659c/mazF2 with Rv2874/dipZ

Normalized LFCs for Rv0659c/mazF2:
(description and provenance of datasets)
Rv0659c/mazF2Rv2874/dipZ
Fe_supp_jason_reseq

2.262

1.197

low_pH_jason_reseq

0.074

0.955

NO_jason_reseq

0.811

0.268

B6_jason_reseq

1.417

0.568

MHCII_jason_reseq

2.051

1.152

Isoniazid02

-0.019

0.979

Rifampicin4

0.271

0.097

Ethambutol3

-0.072

1.249

Meropenem3

0.468

0.264

Vancomycin16

0.793

0.584

Rv2680_day32

0.197

0.522

H37Rv_KO_MarP

-0.714

0.317

hypoxia_3wks

0.108

-0.335

hypoxia_6wks

-0.102

-0.104

glycerol

-0.187

-0.556

cholesterol

-0.725

-0.102

AJ

0.03

0.131

Bibs02

0.375

0.279

Bibs02c

0.108

0.156

BL6

0.655

-0.604

BL6a

0.217

-0.521

BXD01

-0.687

-0.326

BXD010

-0.021

-0.2

BXD011

0.261

0.246

BXD03

-0.069

-0.212

BXD04

-0.236

-0.325

BXD05

0.319

-0.387

BXD06

0.303

-0.079

BXD07

0.027

-0.381

BXD08

0.912

-0.253

BXD09

0.054

-0.268

CAST

0.404

0.067

CCcont

-0.345

-0.507

DS01

0.453

0.322

DS02

0.295

-0.175

DS04

0.989

0.264

DS0c

-0.396

0.063

GP01

-0.554

-0.951

GP02

0.24

-0.511

GP0c

0.291

-0.174

NOD

0.773

0.065

NZO

-0.094

0.0

PWK

1.204

-0.058

H37Rv_KO_CtpC

0.062

-0.235

H37Rv_KO_CtpD

-0.703

0.775

H37Rv_KO_Rv1272

1.723

0.203

H37Rv_KO_SugABC

0.794

0.809

H37Rv_KO_MbtN

-0.98

-0.67

Trans05

0.755

-0.039

macrophage_unactivated

1.035

-0.372

IL1

-0.131

-0.098

Rapamycin

0.779

0.193

Tcell

0.0

-0.108

GMCSF

0.848

-0.174

IFNab

0.375

-0.148

IFNg

0.126

0.251

IFNg_GMCSF1

1.21

1.241

Rv1432_day32

-0.332

-0.184

Rv1565c_day32

0.0

-0.196

secA2_input

-1.644

-0.218

delta_Rv3594

-0.018

-0.312

delta_Rv3717

-0.725

-0.459

delta_Rv3811

-0.21

-0.369

delta_Rv0954

-0.496

0.689

PonA1

-0.739

-0.665

EccD1_KO

-0.095

0.253

EspI_KO

-0.299

0.722

PE35_KO

0.128

1.152

PPE68_KO

0.154

0.704

glycerol2

-0.499

0.042

lignocerate

-0.11

0.091

oleate

-0.421

-0.021

phosphatidylcholine

-0.499

0.165

acetate

-0.209

0.243

glucAc

0.021

-0.098

Rv0950ko

-0.19

-0.476

Rv1096ko

-0.054

-0.911

Rv3684ko

-0.255

-0.773

delta_otsA_trehalose

0.068

0.23