Top 10 genes with highest correlation to Rv0633c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.5655) | info on Rv0347/- |
| Rv2392/cysH | (cc=0.5297) | info on Rv2392/cysH |
| Rv0650/- | (cc=0.5139) | info on Rv0650/- |
| Rv0631c/recC | (cc=0.5096) | info on Rv0631c/recC |
| Rv2672/- | (cc=0.4924) | info on Rv2672/- |
| Rv0634A/- | (cc=0.483) | info on Rv0634A/- |
| Rv1178/- | (cc=0.4685) | info on Rv1178/- |
| Rv0673/echA4 | (cc=0.4624) | info on Rv0673/echA4 |
| Rv0435c/- | (cc=0.4604) | info on Rv0435c/- |
| Rv0300/vapB2 | (cc=0.4561) | info on Rv0300/vapB2 |
Correlation of Rv0633c/- with Rv1178/-
Normalized LFCs for Rv0633c/-:
(description and provenance of datasets)
| Rv0633c/- | Rv1178/- | |
| Fe_supp_jason_reseq | 0.415 | -1.039 |
| low_pH_jason_reseq | -0.738 | 0.527 |
| NO_jason_reseq | -0.945 | -5.222 |
| B6_jason_reseq | 0.198 | -1.36 |
| MHCII_jason_reseq | 0.257 | -2.581 |
| Isoniazid02 | 0.432 | -1.072 |
| Rifampicin4 | 0.133 | -0.523 |
| Ethambutol3 | 0.978 | 1.677 |
| Meropenem3 | 0.68 | 1.154 |
| Vancomycin16 | 0.186 | -0.976 |
| Rv2680_day32 | -0.867 | -2.122 |
| H37Rv_KO_MarP | 0.222 | 3.838 |
| hypoxia_3wks | 0.128 | -4.625 |
| hypoxia_6wks | -0.451 | -2.422 |
| glycerol | -0.015 | 1.631 |
| cholesterol | 0.486 | 1.675 |
| AJ | -0.588 | -0.585 |
| Bibs02 | -0.007 | -0.294 |
| Bibs02c | -0.453 | -0.277 |
| BL6 | 0.361 | -0.53 |
| BL6a | -0.014 | 0.049 |
| BXD01 | -0.601 | -0.458 |
| BXD010 | -0.643 | -0.065 |
| BXD011 | -0.475 | -0.243 |
| BXD03 | -0.13 | -0.573 |
| BXD04 | -0.606 | 0.117 |
| BXD05 | 0.458 | -0.975 |
| BXD06 | -0.478 | -0.337 |
| BXD07 | 0.159 | 0.034 |
| BXD08 | -0.92 | -0.422 |
| BXD09 | -0.298 | -0.494 |
| CAST | 0.265 | -0.654 |
| CCcont | -0.473 | 1.517 |
| DS01 | 0.068 | -0.83 |
| DS02 | 0.236 | -0.288 |
| DS04 | -0.073 | 0.0 |
| DS0c | -0.132 | -1.268 |
| GP01 | 0.26 | -0.382 |
| GP02 | -0.905 | -0.839 |
| GP0c | -0.438 | -0.551 |
| NOD | -0.348 | -0.789 |
| NZO | 0.087 | 0.405 |
| PWK | -0.126 | -1.326 |
| H37Rv_KO_CtpC | -0.435 | 0.329 |
| H37Rv_KO_CtpD | -0.528 | 0.061 |
| H37Rv_KO_Rv1272 | -0.708 | -0.109 |
| H37Rv_KO_SugABC | 0.421 | 0.138 |
| H37Rv_KO_MbtN | -0.998 | -0.558 |
| Trans05 | -0.58 | 0.0 |
| macrophage_unactivated | -0.464 | 0.609 |
| IL1 | 0.546 | 0.463 |
| Rapamycin | 0.89 | 1.114 |
| Tcell | 0.326 | 0.388 |
| GMCSF | 0.605 | -1.436 |
| IFNab | 0.771 | -1.297 |
| IFNg | 0.492 | -1.0 |
| IFNg_GMCSF1 | 0.314 | 0.49 |
| Rv1432_day32 | -1.269 | -1.602 |
| Rv1565c_day32 | 0.158 | -3.533 |
| secA2_input | 0.571 | -0.205 |
| delta_Rv3594 | 0.162 | -0.199 |
| delta_Rv3717 | -0.259 | -1.602 |
| delta_Rv3811 | -0.17 | -1.344 |
| delta_Rv0954 | 0.393 | 2.212 |
| PonA1 | 0.617 | 1.711 |
| EccD1_KO | 0.464 | 0.47 |
| EspI_KO | -0.445 | 0.485 |
| PE35_KO | 0.432 | 0.723 |
| PPE68_KO | 0.173 | 0.873 |
| glycerol2 | -0.755 | -1.789 |
| lignocerate | -0.449 | -2.153 |
| oleate | -0.44 | -2.105 |
| phosphatidylcholine | -0.647 | -2.899 |
| acetate | -0.216 | -0.888 |
| glucAc | 0.605 | -0.754 |
| Rv0950ko | 1.098 | 3.745 |
| Rv1096ko | 2.117 | 2.569 |
| Rv3684ko | 2.103 | 3.871 |
| delta_otsA_trehalose | -0.801 | 0.415 |