Top 10 genes with highest correlation to Rv0632c/echA3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3774/echA21 | (cc=0.5198) | info on Rv3774/echA21 |
| Rv0048c/- | (cc=0.432) | info on Rv0048c/- |
| Rv3263/- | (cc=0.4239) | info on Rv3263/- |
| Rv3168/- | (cc=0.4145) | info on Rv3168/- |
| Rv2806/- | (cc=0.4039) | info on Rv2806/- |
| Rv1239c/corA | (cc=0.4013) | info on Rv1239c/corA |
| Rv2320c/rocE | (cc=0.3981) | info on Rv2320c/rocE |
| Rv2898c/- | (cc=0.3865) | info on Rv2898c/- |
| Rv3690/- | (cc=0.3817) | info on Rv3690/- |
| Rv0804/- | (cc=0.3773) | info on Rv0804/- |
Correlation of Rv0632c/echA3 with Rv3168/-
Normalized LFCs for Rv0632c/echA3:
(description and provenance of datasets)
| Rv0632c/echA3 | Rv3168/- | |
| Fe_supp_jason_reseq | -1.642 | 0.789 |
| low_pH_jason_reseq | 0.659 | 0.383 |
| NO_jason_reseq | -1.683 | 0.711 |
| B6_jason_reseq | 1.226 | 0.903 |
| MHCII_jason_reseq | -0.688 | 0.85 |
| Isoniazid02 | -0.448 | 0.383 |
| Rifampicin4 | -0.49 | -0.872 |
| Ethambutol3 | 0.309 | -0.06 |
| Meropenem3 | -0.404 | 0.056 |
| Vancomycin16 | -0.48 | 0.905 |
| Rv2680_day32 | -1.75 | 0.465 |
| H37Rv_KO_MarP | 0.756 | -0.209 |
| hypoxia_3wks | 1.053 | 2.121 |
| hypoxia_6wks | 2.351 | 2.397 |
| glycerol | -0.047 | -0.098 |
| cholesterol | 0.014 | 0.338 |
| AJ | -0.393 | 0.309 |
| Bibs02 | 0.415 | 1.142 |
| Bibs02c | 0.558 | -0.209 |
| BL6 | -0.661 | -1.322 |
| BL6a | 0.288 | 0.264 |
| BXD01 | 0.48 | 0.422 |
| BXD010 | 0.683 | 0.766 |
| BXD011 | 1.214 | 0.655 |
| BXD03 | -0.038 | -0.245 |
| BXD04 | 1.201 | 0.981 |
| BXD05 | 0.392 | 0.975 |
| BXD06 | 1.466 | 1.117 |
| BXD07 | -0.019 | 0.97 |
| BXD08 | 0.156 | -0.204 |
| BXD09 | -0.033 | 1.002 |
| CAST | 0.564 | 0.537 |
| CCcont | -2.271 | -1.578 |
| DS01 | -0.123 | 0.163 |
| DS02 | -0.199 | -0.654 |
| DS04 | 0.291 | -0.71 |
| DS0c | 0.163 | -0.793 |
| GP01 | 0.014 | -1.43 |
| GP02 | 0.059 | -0.996 |
| GP0c | -0.747 | -1.292 |
| NOD | -0.356 | -0.109 |
| NZO | -0.027 | 0.348 |
| PWK | 2.134 | 0.769 |
| H37Rv_KO_CtpC | -0.461 | -0.039 |
| H37Rv_KO_CtpD | -1.072 | -0.229 |
| H37Rv_KO_Rv1272 | -0.359 | -0.666 |
| H37Rv_KO_SugABC | 1.032 | 1.598 |
| H37Rv_KO_MbtN | 0.488 | -0.487 |
| Trans05 | -0.371 | -0.063 |
| macrophage_unactivated | -0.379 | -0.496 |
| IL1 | 0.039 | -0.128 |
| Rapamycin | 0.417 | 0.19 |
| Tcell | 1.287 | 0.645 |
| GMCSF | -0.396 | -0.478 |
| IFNab | -1.167 | -0.13 |
| IFNg | 0.572 | 1.165 |
| IFNg_GMCSF1 | -0.044 | 0.562 |
| Rv1432_day32 | 1.731 | -0.632 |
| Rv1565c_day32 | -1.374 | 0.0 |
| secA2_input | -0.103 | -0.401 |
| delta_Rv3594 | -0.488 | 0.493 |
| delta_Rv3717 | 0.459 | 0.555 |
| delta_Rv3811 | 0.0 | -0.077 |
| delta_Rv0954 | -0.51 | 0.306 |
| PonA1 | 0.321 | -0.328 |
| EccD1_KO | 0.51 | -1.273 |
| EspI_KO | -0.827 | -2.048 |
| PE35_KO | 0.0 | -0.169 |
| PPE68_KO | -0.403 | 0.0 |
| glycerol2 | -0.548 | -0.902 |
| lignocerate | -0.835 | -1.525 |
| oleate | -0.846 | -0.978 |
| phosphatidylcholine | -0.335 | -0.839 |
| acetate | -0.992 | -1.478 |
| glucAc | -1.855 | -2.128 |
| Rv0950ko | -0.214 | 0.736 |
| Rv1096ko | 0.461 | 1.016 |
| Rv3684ko | 0.147 | -1.277 |
| delta_otsA_trehalose | -1.083 | 2.697 |