Top 10 genes with highest correlation to Rv0632c/echA3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3774/echA21 | (cc=0.5198) | info on Rv3774/echA21 |
| Rv0048c/- | (cc=0.432) | info on Rv0048c/- |
| Rv3263/- | (cc=0.4239) | info on Rv3263/- |
| Rv3168/- | (cc=0.4145) | info on Rv3168/- |
| Rv2806/- | (cc=0.4039) | info on Rv2806/- |
| Rv1239c/corA | (cc=0.4013) | info on Rv1239c/corA |
| Rv2320c/rocE | (cc=0.3981) | info on Rv2320c/rocE |
| Rv2898c/- | (cc=0.3865) | info on Rv2898c/- |
| Rv3690/- | (cc=0.3817) | info on Rv3690/- |
| Rv0804/- | (cc=0.3773) | info on Rv0804/- |
Correlation of Rv0632c/echA3 with Rv2320c/rocE
Normalized LFCs for Rv0632c/echA3:
(description and provenance of datasets)
| Rv0632c/echA3 | Rv2320c/rocE | |
| Fe_supp_jason_reseq | -1.642 | -0.251 |
| low_pH_jason_reseq | 0.659 | -0.908 |
| NO_jason_reseq | -1.683 | -0.48 |
| B6_jason_reseq | 1.226 | -0.231 |
| MHCII_jason_reseq | -0.688 | -0.011 |
| Isoniazid02 | -0.448 | 0.048 |
| Rifampicin4 | -0.49 | 0.089 |
| Ethambutol3 | 0.309 | -0.04 |
| Meropenem3 | -0.404 | -0.081 |
| Vancomycin16 | -0.48 | 0.255 |
| Rv2680_day32 | -1.75 | -2.734 |
| H37Rv_KO_MarP | 0.756 | -0.1 |
| hypoxia_3wks | 1.053 | 0.459 |
| hypoxia_6wks | 2.351 | 0.263 |
| glycerol | -0.047 | -0.016 |
| cholesterol | 0.014 | 0.185 |
| AJ | -0.393 | 0.486 |
| Bibs02 | 0.415 | -0.09 |
| Bibs02c | 0.558 | 0.326 |
| BL6 | -0.661 | -0.159 |
| BL6a | 0.288 | 0.748 |
| BXD01 | 0.48 | 0.129 |
| BXD010 | 0.683 | -0.118 |
| BXD011 | 1.214 | 0.386 |
| BXD03 | -0.038 | 0.172 |
| BXD04 | 1.201 | 0.722 |
| BXD05 | 0.392 | 0.254 |
| BXD06 | 1.466 | 0.412 |
| BXD07 | -0.019 | 0.427 |
| BXD08 | 0.156 | -0.169 |
| BXD09 | -0.033 | 0.209 |
| CAST | 0.564 | 0.711 |
| CCcont | -2.271 | -0.453 |
| DS01 | -0.123 | 0.368 |
| DS02 | -0.199 | -0.238 |
| DS04 | 0.291 | -0.548 |
| DS0c | 0.163 | 0.245 |
| GP01 | 0.014 | -0.589 |
| GP02 | 0.059 | -0.636 |
| GP0c | -0.747 | -0.758 |
| NOD | -0.356 | -0.036 |
| NZO | -0.027 | 0.24 |
| PWK | 2.134 | 0.136 |
| H37Rv_KO_CtpC | -0.461 | 0.088 |
| H37Rv_KO_CtpD | -1.072 | 0.745 |
| H37Rv_KO_Rv1272 | -0.359 | -0.521 |
| H37Rv_KO_SugABC | 1.032 | 0.956 |
| H37Rv_KO_MbtN | 0.488 | -0.095 |
| Trans05 | -0.371 | 0.176 |
| macrophage_unactivated | -0.379 | 0.211 |
| IL1 | 0.039 | 0.086 |
| Rapamycin | 0.417 | 0.058 |
| Tcell | 1.287 | 0.094 |
| GMCSF | -0.396 | 0.227 |
| IFNab | -1.167 | 0.342 |
| IFNg | 0.572 | 0.446 |
| IFNg_GMCSF1 | -0.044 | -0.031 |
| Rv1432_day32 | 1.731 | 1.351 |
| Rv1565c_day32 | -1.374 | 0.734 |
| secA2_input | -0.103 | -1.338 |
| delta_Rv3594 | -0.488 | 0.324 |
| delta_Rv3717 | 0.459 | -0.54 |
| delta_Rv3811 | 0.0 | -0.37 |
| delta_Rv0954 | -0.51 | -0.389 |
| PonA1 | 0.321 | -0.388 |
| EccD1_KO | 0.51 | 0.191 |
| EspI_KO | -0.827 | -0.448 |
| PE35_KO | 0.0 | 0.753 |
| PPE68_KO | -0.403 | 0.278 |
| glycerol2 | -0.548 | -0.621 |
| lignocerate | -0.835 | -0.33 |
| oleate | -0.846 | -0.35 |
| phosphatidylcholine | -0.335 | -0.328 |
| acetate | -0.992 | -0.389 |
| glucAc | -1.855 | -0.762 |
| Rv0950ko | -0.214 | 0.229 |
| Rv1096ko | 0.461 | 0.401 |
| Rv3684ko | 0.147 | 0.793 |
| delta_otsA_trehalose | -1.083 | 0.031 |