Top 10 genes with highest correlation to Rv0618/galTa:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0149/- | (cc=0.4613) | info on Rv0149/- |
| Rv2129c/- | (cc=0.4593) | info on Rv2129c/- |
| Rv0492c/- | (cc=0.4553) | info on Rv0492c/- |
| Rv2734/- | (cc=0.4515) | info on Rv2734/- |
| Rv2389c/rpfD | (cc=0.4491) | info on Rv2389c/rpfD |
| Rv0036c/- | (cc=0.425) | info on Rv0036c/- |
| Rv1949c/- | (cc=0.4192) | info on Rv1949c/- |
| Rv3705c/- | (cc=0.4104) | info on Rv3705c/- |
| Rv0408/pta | (cc=0.405) | info on Rv0408/pta |
| Rv0085/hycP | (cc=0.4043) | info on Rv0085/hycP |
Correlation of Rv0618/galTa with Rv3705c/-
Normalized LFCs for Rv0618/galTa:
(description and provenance of datasets)
| Rv0618/galTa | Rv3705c/- | |
| Fe_supp_jason_reseq | 1.384 | 2.062 |
| low_pH_jason_reseq | -0.788 | -0.487 |
| NO_jason_reseq | 1.121 | 0.601 |
| B6_jason_reseq | -1.428 | -0.574 |
| MHCII_jason_reseq | 0.111 | -0.594 |
| Isoniazid02 | 0.202 | 0.939 |
| Rifampicin4 | 0.596 | 1.321 |
| Ethambutol3 | 0.914 | 1.154 |
| Meropenem3 | 2.086 | 3.689 |
| Vancomycin16 | 0.785 | 0.966 |
| Rv2680_day32 | 0.0 | -0.788 |
| H37Rv_KO_MarP | 1.023 | 0.301 |
| hypoxia_3wks | -0.658 | 1.037 |
| hypoxia_6wks | -0.532 | 0.0 |
| glycerol | 1.442 | 0.209 |
| cholesterol | -0.03 | 0.044 |
| AJ | -1.368 | -0.111 |
| Bibs02 | -0.513 | -0.848 |
| Bibs02c | 0.427 | 0.332 |
| BL6 | -0.53 | -0.06 |
| BL6a | -0.169 | -0.063 |
| BXD01 | 1.083 | -0.244 |
| BXD010 | -0.054 | 0.365 |
| BXD011 | 0.238 | 0.45 |
| BXD03 | -0.241 | 0.635 |
| BXD04 | 1.268 | 0.0 |
| BXD05 | -0.341 | 1.224 |
| BXD06 | 0.203 | 0.487 |
| BXD07 | 0.082 | 0.781 |
| BXD08 | -0.446 | 0.57 |
| BXD09 | 0.526 | 0.434 |
| CAST | -0.302 | -1.43 |
| CCcont | -0.936 | 1.299 |
| DS01 | 0.186 | -0.356 |
| DS02 | -0.336 | -0.665 |
| DS04 | -1.29 | -0.031 |
| DS0c | -0.284 | 1.719 |
| GP01 | 2.161 | 0.539 |
| GP02 | 0.156 | -0.728 |
| GP0c | 1.475 | 1.628 |
| NOD | -1.674 | -0.506 |
| NZO | -0.308 | -0.829 |
| PWK | -2.136 | 0.259 |
| H37Rv_KO_CtpC | -0.068 | 1.499 |
| H37Rv_KO_CtpD | 0.781 | 1.667 |
| H37Rv_KO_Rv1272 | 0.445 | 0.784 |
| H37Rv_KO_SugABC | 0.851 | -0.186 |
| H37Rv_KO_MbtN | 1.755 | 0.494 |
| Trans05 | 1.168 | 0.477 |
| macrophage_unactivated | -0.079 | 0.445 |
| IL1 | 1.376 | 0.383 |
| Rapamycin | 0.365 | 0.997 |
| Tcell | 0.081 | -0.512 |
| GMCSF | 1.41 | 1.695 |
| IFNab | -0.233 | 0.949 |
| IFNg | 0.78 | 2.253 |
| IFNg_GMCSF1 | 0.446 | 1.439 |
| Rv1432_day32 | 1.356 | -0.035 |
| Rv1565c_day32 | 0.0 | 0.049 |
| secA2_input | -0.487 | 1.238 |
| delta_Rv3594 | -0.555 | 0.148 |
| delta_Rv3717 | 0.419 | 0.133 |
| delta_Rv3811 | 0.077 | -0.486 |
| delta_Rv0954 | 0.823 | 1.434 |
| PonA1 | -0.871 | 0.481 |
| EccD1_KO | 0.227 | -1.707 |
| EspI_KO | -0.068 | -1.409 |
| PE35_KO | -0.592 | -0.648 |
| PPE68_KO | -0.563 | -1.881 |
| glycerol2 | -1.24 | -0.998 |
| lignocerate | -0.826 | -0.924 |
| oleate | 0.021 | -0.301 |
| phosphatidylcholine | 0.083 | -1.2 |
| acetate | -1.872 | -0.229 |
| glucAc | -2.672 | -1.093 |
| Rv0950ko | -0.582 | 0.401 |
| Rv1096ko | -0.763 | -0.998 |
| Rv3684ko | 2.24 | -0.704 |
| delta_otsA_trehalose | 0.623 | 1.992 |